Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq139 93.3 1e-13 >seq139 Length=3560323 Score = 93.3 bits (102), Expect = 1e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 364118 AGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACA 364177 |||| |||| ||| || || || || |||| |||||||| || || || ||| | |||| Sbjct 1635663 AGCTTTGGTATGCGATTATTGAGTCTCAGACAGAGACAGGTACCCCATACATGCTCTACA 1635722 Query 364178 AAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACC 364237 ||||||| || ||||| ||| ||| |||||| |||| || ||||| | ||||||| Sbjct 1635723 AAGATTCCTGTAACCGGAAGAGCAATCAGCAGAACCTGGGAACAATCAAATGCAGCAACC 1635782 Query 364238 TATGTACCGAGATTATTGAATACACC 364263 | || || || || | ||||| ||| Sbjct 1635783 TGTGCACAGAAATAGTAGAATATACC 1635808 Score = 86.0 bits (94), Expect = 2e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 || || |||||||| || || |||||| ||| || || |||||||||||||| | Sbjct 1634340 GGAGCATTTGCTATTTACCTGGAGCCTTGGCATTTAGACATCTTTGAGTTTCTTGATTTA 1634399 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| ||||| ||||| || ||| |||||| | || || |||| ||| |||||| || Sbjct 1634400 AAGAAGAACACAGGAAAGGAAGAACAGCGTGCCAGGGACCTTTTCTTTGCCCTTTGGATT 1634459 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG 363984 | || | || ||||| || |||||| Sbjct 1634460 CCAGATCTCTTCATGAAACGAGTGGAG 1634486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303158987313428