Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1765 105 6e-18 seq5750 100 2e-16 >seq1765 Length=41513 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || ||||| || ||||| || | || ||| |||| |||||| ||| Sbjct 9841 AATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 9782 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 9781 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 9722 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || || Sbjct 9721 GCAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAA 9662 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || ||||| || || Sbjct 9661 CATCCAGAAAGAGTCCAC 9644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || ||| |||| |||||| ||| Sbjct 9612 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 9553 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 9552 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 9493 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || ||| Sbjct 9492 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 9433 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 9432 ATCCAGAAAGAGTCCAC 9416 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | || ||| |||| |||||| ||| Sbjct 9384 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 9325 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 9324 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 9265 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGATTATA 24168 ||| | ||||| | | ||||||||| || ||||| | | | |||| ||| || | Sbjct 9264 CAGCGGCTGATCTTTGCCGGCAAGCAGCTGGAAGACGGGCGCACCCCGTC--CGACTACA 9207 Query 24169 ACATTCAAAAAGAATCTAC 24187 |||| || ||||| || || Sbjct 9206 ACATCCAGAAAGAGTCCAC 9188 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | || ||| |||| |||||| ||| Sbjct 9156 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 9097 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 9096 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 9037 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 ||| | ||||| | | ||||||||| || ||||| Sbjct 9036 CAGCGGCTGATCTTTGCCGGCAAGCAGCTGGAAGA 9002 >seq5750 Length=9448 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || ||||| || || || || | || ||| |||| |||||| ||| Sbjct 8771 AATGCAGATCTTCGTGAAAACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 8712 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 8711 TGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 8652 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || || Sbjct 8651 GCAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAA 8592 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || ||||| || || Sbjct 8591 CATCCAGAAAGAGTCCAC 8574 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | || ||| |||| |||||| ||| Sbjct 8314 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 8255 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 8254 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 8195 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || ||| Sbjct 8194 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 8135 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 8134 ATCCAGAAAGAGTCCAC 8118 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || ||| |||| |||||| ||| Sbjct 8086 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 8027 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 8026 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 7967 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || ||| Sbjct 7966 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 7907 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 7906 ATCCAGAAAGAGTCCAC 7890 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || ||| |||| |||||| ||| Sbjct 8542 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 8483 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| |||||||| ||||| || || || || Sbjct 8482 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 8423 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||||||||| || ||||| | | | | | ||| || ||| Sbjct 8422 CAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAAC 8363 Query 24171 ATTCAAAAAGAATCTAC 24187 || || ||||| || || Sbjct 8362 ATCCAGAAAGAGTCCAC 8346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429874934846370