Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq356 91.5 1e-13 seq166 87.8 2e-12 >seq356 Length=1115386 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| || || || || || || || || ||||| ||| | || |||| || Sbjct 17939 AAAATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 17880 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || ||||| ||| | || ||| || || ||||| |||||| ||||| ||| Sbjct 17879 AGTGACACCATTGAGAATGTTAAAGCCAAGATCCAGGATAAGGAAGGCATCCCCCCTGAC 17820 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || || || | ||| ||||| || | ||||||| | || | | ||||| Sbjct 17819 CAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 17760 Query 115463 AACATTCAAAAAGAGTCTAC 115482 ||||| || |||||||| || Sbjct 17759 AACATCCAGAAAGAGTCCAC 17740 >seq166 Length=2973255 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 ||||| ||||| | || ||||||||||||||| || | ||| ||||| ||||| ||| Sbjct 2554432 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAATTGGAA 2554491 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || | | || || | || || ||||||||||| ||||| ||| | ||| | |||||| Sbjct 2554492 GACGGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTG 2554551 Query 115499 AGA 115501 ||| Sbjct 2554552 AGA 2554554 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| |||||||| ||||| |||||||| || ||||| || |||| || || Sbjct 998269 AAGATGCAGATTTTTGTGAAAACCCTCACGGGGAAGACCATCACTCTCGAGGTTGAACCC 998328 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || | | | | ||||| || || ||||| ||||| | || | || Sbjct 998329 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTCAT 998388 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||||||||| | | ||| ||||| ||| | | ||||| | || || | || || Sbjct 998389 CAGCAAAGACTGGTCTTTGCTGGCAAGCAACTGGCAGATGGACATACTTTGTCTGACTA- 998447 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501 ||||||||||| ||||| ||| | | | | ||||||||| Sbjct 998448 AACATTCAAAAGGAGTCCACTCTTCCTCTTGTGTTGAGA 998486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425283587062480