Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq69 123 2e-23 seq247 120 3e-22 seq132 114 1e-20 seq1765 107 2e-18 seq62 98.7 9e-16 >seq69 Length=5728823 Score = 123 bits (136), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || ||||||| | | || ||| | | Sbjct 4210317 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGCGGTTGAGCCCAGT 4210376 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| | || |||| |||| || ||||| || || || ||||||||| Sbjct 4210377 GACACCATTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCCACCTGAC 4210433 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||| |||||||| |||| |||| ||||||| | || ||| Sbjct 4210434 CAGCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCGCACTCTCTCAGACTAC 4210493 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| ||||| || || || ||||| Sbjct 4210494 AATATTCAGAAAGAGTCCACCCTGCACTTGGTGCT 4210528 >seq247 Length=1816170 Score = 120 bits (132), Expect = 3e-22 Identities = 157/215 (73%), Gaps = 7/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||| |||| || || ||||||| | || |||||| | | Sbjct 1422772 ATGCAGATCTTTGTGAAGAGCCTGACTGGCAAGACCATCACCCTTGAGGTGGAGCCCAGT 1422713 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| | || |||| |||| | ||||| || || | ||||||||| Sbjct 1422712 GACACCATTGAG--AATGTCAAAGCTAAAATCGA--GACAAGGAGGGCACCCCACCTGAC 1422657 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | |||||||| |||||||| |||| |||| |||| || || || ||| Sbjct 1422656 CAGCAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGTCGCGCTCTGTCAGACTAC 1422597 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| ||||| || || || ||||| Sbjct 1422596 AATATTCAGAAAGAGTCCACCCTGCACTTGGTGCT 1422562 >seq132 Length=3652367 Score = 114 bits (126), Expect = 1e-20 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || |||||||| | || | ||| | | Sbjct 468446 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGTCCATCACCCTTGAGATTGAGCCCAGT 468505 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || ||| | || |||| |||| || ||||| || || || ||||||||| Sbjct 468506 GACACCATTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATCCCACCTGAC 468562 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || |||| | |||||||| |||||||| |||| |||| |||||| | || || Sbjct 468563 CATCAGCATCTGATTTTTGCGGGCAAACAGCTAGAGGATGGCCGCACTCTCTCAGACTAA 468622 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| ||||| || || || || || Sbjct 468623 AATATTCAGAAAGAGTCCACCCTGCACTTGGTTCT 468657 >seq1765 Length=41513 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| |||| || ||| | | Sbjct 9384 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 9325 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| |||||||| || || || || ||||| Sbjct 9324 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 9265 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||||| | || ||||||||||| || | ||||| | ||||| | ||| ||||| Sbjct 9264 CAGCGGCTGATCTTTGCCGGCAAGCAGCTGGAAGACGGGCGCACCCCGTCCGACTACAAC 9205 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| ||||| || || | || || | || ||||| || Sbjct 9204 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGCGCCTGAGAGGTGG 9158 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| |||| || ||| | | Sbjct 9156 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 9097 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| |||||||| || || || || ||||| Sbjct 9096 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCAG 9037 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || ||||||||||| || | ||||| | ||||| || ||| ||||| Sbjct 9036 CAGCGGCTGATCTTTGCCGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCCGACTACAA 8978 >seq62 Length=6495742 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| || || ||||||| |||| || || | | Sbjct 4413104 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAACCCAGT 4413163 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| | ||| | || |||| |||| || ||| || || || || |||||| Sbjct 4413164 GACACCACTGAG--AGTGTCAAAGCTAAAATCCAA-GACCGGGAGGGCATCCCGCCTGAC 4413220 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | ||||||||||||||||| | || |||| |||||| | || ||| Sbjct 4413221 CAGCAGCGCCTGATTTTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTAC 4413280 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGC 25209 |||||||| ||||| ||||| || || || |||| Sbjct 4413281 AATATTCAGAAAGAGTCCACCCTGCACTTGGTGC 4413314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433266453070010