Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq10 129 7e-25 >seq10 Length=16450340 Score = 129 bits (142), Expect = 7e-25 Identities = 375/573 (65%), Gaps = 22/573 (4%) Strand=Plus/Minus Query 92923 TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACG 92982 |||||||| || ||||| |||||| ||||| | |||||||| | | | | Sbjct 11919704 TCTATCAGTCACGAATTCAATGTACCCCTTCATCAGAGTGCAATTCATCGCAATGACATT 11919645 Query 92983 TACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTC 93042 || || | || || || | ||| || | ||| || |||| || | | | ||| || Sbjct 11919644 CACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCCAACAGCGTTGGTGATGATCTC 11919585 Query 93043 TATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTC 93102 | | || || | || ||||| || | | | ||| |||| | ||| |||||||| Sbjct 11919584 TTTCACCCTCTGCTCTGCAGGTTTGTGCAGCAGGTGTTTGAACATCAGGCAGGCAAAGTC 11919525 Query 93103 GGTATGTAAACCTTCGTCTCGTGATA-TCAACTCATTGCTGAATGTTAAACCTGGTAACA 93161 || ||||| || |||| || || ||| | ||| ||||| | || || | || Sbjct 11919524 TCAGTGCAAACCCTCATCTC-TGCTACTCATTTGGTTGGAGAATG--AGGCCAGGCACCA 11919468 Query 93162 GTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCA 93221 | ||| |||||||||||| ||||| | |||||| || || ||||||| Sbjct 11919467 GGTCTCATTTCTTGAGCCAGAATATCGGCGCAAAAG-----------AAGATTCCTTCCA 11919419 Query 93222 CGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG---CTGATCCATT 93278 | | ||||| || |||| |||||| || | |||| | || |||||||| Sbjct 11919418 CTGTGGCAAACGCTACAACACGTTCTCCATAG---GCGGTCTCTTTGTTCCTGATCCAAC 11919362 Query 93279 TTAAAGCCCAATC-GGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGG 93337 || ||||| | |||| ||||| |||||| | || || | ||||| || || Sbjct 11919361 GCAAGGCCCAGCCAGGCTGCCTTCTTGGCACAAGGCATCGTCTCCACGGCGTTGAAGAGC 11919302 Query 93338 TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAA 93397 | || | || | | |||| |||| || || || | ||| |||||||||||| Sbjct 11919301 AACTCCCTTTCCTTGGCATCTTTAATGTCAGTGTCAATGAGGAGACTGTACATTTCAGAA 11919242 Query 93398 TGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACT 93457 |||| || ||||| ||||||||||| | ||||||||| | ||||| |||||||| ||| Sbjct 11919241 TGGATGTTTTCCATGGCAATTTGGAAGCTGTAGAAACAGCGGGCTTCGGTGATCTGAACT 11919182 Query 93458 TCTTGAGAAAATCTCTCTACGAGATTTTCATTG 93490 ||||| ||| | ||| || | || |||||| Sbjct 11919181 TCTTGGCTAAACCGCTCCACCAAGTTCTCATTG 11919149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556779679302960