Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq29 100 2e-16 seq356 98.7 8e-16 seq43 95.1 1e-14 seq5 87.8 2e-12 seq395 82.4 6e-11 seq110 82.4 6e-11 >seq29 Length=10643064 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | ||| || || |||||||||||||| || Sbjct 9522373 ACCACCACGAAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGA 9522432 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || ||||| ||||| || ||||| |||| || | || || || ||||| Sbjct 9522433 CAAAGTGCGCCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 9522492 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| || | | ||| | || || | || ||| || Sbjct 9522493 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATCGTATCCGAGGGTTCAAC 9522552 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || ||||| || ||||||||||| Sbjct 9522553 CTCGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAAATCTGCAT 9522600 >seq356 Length=1115386 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || || || ||| Sbjct 17740 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 17799 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| || || |||||||| || || ||||| ||| Sbjct 17800 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCTTTA 17859 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 17860 ACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 17919 Query 114366 TTTACAAAAATCTGCAT 114382 || || || || ||||| Sbjct 17920 TTCACGAAGATTTGCAT 17936 >seq43 Length=7977881 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 |||||| ||||| |||||||| || | ||| | | ||||| |||||||||||||| || Sbjct 2719150 AATACCACCACGAAGTCTCAACACAAGATGAAGAATGGATTCCTTTTGAATGTTGTAGTC 2719209 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 || |||| | |||||| ||||| || ||||| |||| || ||| || || || Sbjct 2719210 AGACAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAG--TCTGCTGATCAGG 2719267 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 |||||| ||||| || || ||||| ||| | ||| | || || | || ||| Sbjct 2719268 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTCCGTTTTCTATCGTATCTGAGGGTTC 2719327 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| | | || || || || || ||||| || ||||||||| Sbjct 2719328 AACCTCCAGAGGGATGGTCTTCCCTGTGAGGGTTTTCACGTTAATCTGCAT 2719378 >seq5 Length=22519077 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| | ||| |||| ||| || | ||| | || || || ||||||||||||||||| Sbjct 15114132 ACCACTACGAAGTCGCAACACAAGATGGACAGTGGACTCCTTTTGAATGTTGTAATCAGA 15114073 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||| ||||| ||||| || |||| |||| || | || || || ||||| Sbjct 15114072 CAGAGTACATCTGTCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 15114013 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| |||| | ||| | || || | || | | || Sbjct 15114012 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTCCAAC 15113953 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || | || ||||| |||||||||||||| Sbjct 15113952 CTCGAGAGTGATGGTCTTCCCCATGAGGGTTTTCACAAAAATCTGCAT 15113905 >seq395 Length=935364 Score = 82.4 bits (90), Expect = 6e-11 Identities = 151/221 (68%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 114162 CGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTA 114221 || |||||||| || | ||| | || || || ||||||||||||| || | |||| Sbjct 144883 CGAAGTCTCAACACAAGATGGACAGTGGACTCCGTTTGAATGTTGTAGTC----AAAGTA 144938 Query 114222 CGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCT 114281 || |||||| ||||| || ||||| |||| || | || || |||||||| ||| Sbjct 144939 CGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTCACTGATCAGGAGGAATTCCT 144998 Query 114282 TCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACG 114341 || || || ||||| |||| | ||| | || || | || || || | | Sbjct 144999 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGCTCAACCTTGAGA 145058 Query 114342 GTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||||| || | ||||||||||| ||||||||||| Sbjct 145059 GTAATGGTTTTCCCCATGAGAGTTTTTACGAAAATCTGCAT 145099 >seq110 Length=4187069 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/228 (68%), Gaps = 5/228 (2%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | | || || ||| ||||||||| || Sbjct 3764694 ACCACCACGAAGTCTCAACACAAGATGAAGAATGGACTCCTTTC-AATGTTGTAGTC--- 3764749 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | |||| | ||||| ||||| || ||||| |||| || | || || || ||||| Sbjct 3764750 -AAAGTATGTCCGTCTTCCAGTTGCTTGCCAGCAAAGATTAGTCTTTGCTGATCAGGAGG 3764808 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| ||||| | ||| | || || | || ||| || Sbjct 3764809 AATTCCTTCCTTATCCTGGATCTTGGCTTTTACATTTTCTATTGTATCCGAGGGTTCAAC 3764868 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || ||||| || ||||||||||| Sbjct 3764869 CTCGAGAGTGATGGTCTTCCCTGTGAGGGTTTTCACGAAAATCTGCAT 3764916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420074726998248