Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq410 109 1e-18 seq115 96.9 7e-15 >seq410 Length=980372 Score = 109 bits (120), Expect = 1e-18 Identities = 102/127 (80%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| || || |||| || ||||| ||||||||||| ||| | ||||| || ||||||| Sbjct 303646 TGGTGGCGTTCGCCGCAGTGGAGGGAATCTTCTTCTCCGGCTCTTTCGCGTCGATCTTCT 303705 Query 42766 GGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||||||| || ||| | |||||| || ||||||||||| |||||||| || ||||| Sbjct 303706 GGCTCAAGAAGCGAGGCCT-GATGCCTGGCCTCACCTTCTCCAACGAACTTATTAGCAGA 303764 Query 42825 GACGAGG 42831 || |||| Sbjct 303765 GATGAGG 303771 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 ||| || ||||| |||||||||||||| ||||||| ||||| ||||| ||||||||||| Sbjct 305429 CCCATTTGACTTCATGGAGAACATCTCACTGGAGGGGAAGACGAACTTCTTCGAGAAGCG 305488 Query 43130 CGTCGCCGACTACCAG 43145 || | ||| |||||| Sbjct 305489 GGTGGGCGAGTACCAG 305504 >seq115 Length=3908719 Score = 96.9 bits (106), Expect = 7e-15 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| |||| |||||| | || || || || || |||||||| ||| | ||||| Sbjct 3778409 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGCTCATTCGCT 3778468 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||| | ||| | | |||| | |||||| ||||||||||| || || ||||| Sbjct 3778469 GCTATATTCTGGTTAAAGAAAAGAGGTCT-GATGCCTGGACTCACCTTTTCCAATGAACT 3778527 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 3778528 CATCAGCAGAGATGA 3778542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944201633387040