Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq5750 95.1 1e-14 seq1765 93.3 3e-14 seq29 89.7 4e-13 seq24 84.2 2e-11 seq1496 82.4 6e-11 seq1053 82.4 6e-11 seq166 82.4 6e-11 seq62 82.4 6e-11 >seq5750 Length=9448 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 8544 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 8603 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 8604 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 8663 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCA 34079 | || ||||||||| || || ||| | | ||| | | ||| | | ||| Sbjct 8664 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGA-CGTTCTCGATGGTGTCACTGGGCTCGAC 8722 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 |||| || || || || ||||| | |||||||| ||||| |||||| Sbjct 8723 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCATT 8771 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 8088 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 8147 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 8148 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 8207 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 8208 ATGCCCTCTTTGTC 8221 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 8316 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 8375 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 8376 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 8435 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 8436 ATGCCCTCTTTGTC 8449 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 || ||| ||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || Sbjct 7856 GACACCCCCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTC 7915 Query 33957 TGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCAC 34016 | || ||| |||| |||| ||||||||||| || ||||| |||||||| || Sbjct 7916 GGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGG 7975 Query 34017 CGGCACGCTCTCTTTGTC 34034 || | || ||||||||| Sbjct 7976 GGGGATGCCCTCTTTGTC 7993 >seq1765 Length=41513 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 9158 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 9217 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 ||| |||| |||| |||||||||||||| ||||| |||||||| || || Sbjct 9218 GGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCTGGGGGG 9277 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 9278 ATGCCCTCTTTGTC 9291 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 9386 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 9445 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 9446 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 9505 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 9506 ATGCCCTCTTTGTC 9519 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||| ||||| |||||||| || | | Sbjct 9614 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 9673 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||| || ||||| |||||||| || || Sbjct 9674 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 9733 Query 34021 ACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 9734 ATGCCCTCTTTGTC 9747 >seq29 Length=10643064 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 33915 CAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTC 33974 || ||| |||||||||||| |||||| ||||||||||| || | ||| ||| |||| Sbjct 9522388 CAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGCCCGTC 9522447 Query 33975 GTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 |||| ||||||||| ||||| ||||| | |||||||| Sbjct 9522448 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATC 9522486 >seq24 Length=11218282 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/135 (76%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| ||||| ||||| || || ||| ||||||||| |||||||| || | Sbjct 4792631 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 4792572 Query 33961 AAT-TGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | ||| || |||| | || ||||||||||| || ||||| |||||||| | | || Sbjct 4792571 AGGGTGT-GCCCGTCTTTCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGT-CGGGGG 4792514 Query 34020 CACGCTCTCTTTGTC 34034 | || ||||||||| Sbjct 4792513 GATGCCCTCTTTGTC 4792499 >seq1496 Length=61245 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/92 (82%), Gaps = 7/92 (8%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-----GATCT 114383 || |||||||| |||||||||||||||| |||||||||||| ||| | || | Sbjct 14752 TGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCA 14811 Query 114384 AAGGAACCAAAACTGATATATTGAGCCATTCG 114415 ||||||||| ||||||| |||||||||||||| Sbjct 14812 AAGGAACCATAACTGATTTATTGAGCCATTCG 14843 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/92 (82%), Gaps = 7/92 (8%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-----GATCT 115580 || |||||||| |||||||||||||||| |||||||||||| ||| | || | Sbjct 14752 TGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCA 14811 Query 115581 AAGGAACCAAAACTGATATATTGAGCCATTCG 115612 ||||||||| ||||||| |||||||||||||| Sbjct 14812 AAGGAACCATAACTGATTTATTGAGCCATTCG 14843 >seq1053 Length=110669 Score = 82.4 bits (90), Expect = 6e-11 Identities = 73/89 (82%), Gaps = 7/89 (8%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-----GATCTAAG 114386 |||||||| |||||||||||||||| |||||||||||| ||| | || | ||| Sbjct 57159 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAAG 57218 Query 114387 GAACCAAAACTGATATATTGAGCCATTCG 114415 |||||| ||||||| |||||||||||||| Sbjct 57219 GAACCATAACTGATTTATTGAGCCATTCG 57247 Score = 82.4 bits (90), Expect = 6e-11 Identities = 73/89 (82%), Gaps = 7/89 (8%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-----GATCTAAG 115583 |||||||| |||||||||||||||| |||||||||||| ||| | || | ||| Sbjct 57159 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGAGAGGAGCGAGCGACCAAAG 57218 Query 115584 GAACCAAAACTGATATATTGAGCCATTCG 115612 |||||| ||||||| |||||||||||||| Sbjct 57219 GAACCATAACTGATTTATTGAGCCATTCG 57247 >seq166 Length=2973255 Score = 82.4 bits (90), Expect = 6e-11 Identities = 80/102 (78%), Gaps = 6/102 (6%) Strand=Plus/Minus Query 33915 CAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAAT---TGTCGCTC 33971 || ||| |||||||| ||| |||||| ||||||||||| || | ||| |||| | Sbjct 2554551 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTC---C 2554495 Query 33972 GTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 ||| |||||||||||||| ||||| ||||| | |||||||| Sbjct 2554494 GTCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATC 2554453 >seq62 Length=6495742 Score = 82.4 bits (90), Expect = 6e-11 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| ||| || |||||| || || ||| ||| |||||||| ||||| |||| Sbjct 4413330 CCCCCTCGCAGACGAGGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAG 4413271 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || | || |||| || ||||||||||| |||||||||||||| || ||| Sbjct 4413270 AGAGTGCGGC-CATCCTCCAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGG 4413212 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTC 34076 | || ||| || | | |||| |||| || |||| || | ||| | | ||| Sbjct 4413211 GATGCCCTCCCGGT-CTTGGATTTTAGCTT--TGACACTCTCAGTGGTGTCACTGGGTTC 4413155 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | |||| || || || || || || || || ||||| ||||| ||||| Sbjct 4413154 GACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 4413104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397006003986508