Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1765 89.7 5e-13 seq5750 84.2 2e-11 seq29 84.2 2e-11 >seq1765 Length=41513 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || |||||||||||| || || ||| ||| || || || || |||| Sbjct 9647 GACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCG 9706 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || |||||||| ||| || || | Sbjct 9707 AAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACG 9766 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||||| || | || || ||||||| ||||| Sbjct 9767 TTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTTTTC 9826 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 9827 ACGAAGATCTGCAT 9840 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || |||||||||||| | || ||| ||| || || || || |||| | Sbjct 9191 GACTCTTTCTGGATGTTGTAGTCGGACGGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCA 9250 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || |||||||| ||| || || | Sbjct 9251 AAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACG 9310 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||||| || | || || ||||||| || || Sbjct 9311 TTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 9370 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 9371 ACGAAGATCTGCAT 9384 >seq5750 Length=9448 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || |||||||||||| || || ||| ||| || || || || |||| Sbjct 8121 GACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCG 8180 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || |||||||| ||| || || | Sbjct 8181 AAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACA 8240 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||||| || | || || ||||||| || || Sbjct 8241 TTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 8300 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 8301 ACGAAGATCTGCAT 8314 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || |||||||||||| || || ||| ||| || || || || |||| Sbjct 8577 GACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCG 8636 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || |||||||| ||| || || | Sbjct 8637 AAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACG 8696 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||||| || | || || || |||| ||||| Sbjct 8697 TTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTTTTC 8756 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 8757 ACGAAGATCTGCAT 8770 >seq29 Length=10643064 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||||||||| || ||| ||| ||| || ||||| || || | | Sbjct 9522407 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGCCCGTCTTCCAGTTGCTTGCCAGCA 9522466 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | || || || ||||| || ||||| || || ||| || || | Sbjct 9522467 AAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACA 9522526 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | || || | | || ||||||| || | || || || || || ||||| Sbjct 9522527 TTTTCTATCGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCGTGAGGGTTTTC 9522586 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 9522587 ACGAAAATCTGCAT 9522600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496190106974880