Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq69 118 1e-21 seq247 109 5e-19 seq29 100 3e-16 seq62 91.5 1e-13 seq132 84.2 2e-11 seq395 82.4 7e-11 seq374 82.4 7e-11 seq5 82.4 7e-11 >seq69 Length=5728823 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || |||||||| ||||||||||| || | |||||| | Sbjct 4210531 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGACCA 4210472 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || ||||||||||| || || | |||| |||||||| || || || |||||||||||| Sbjct 4210471 TCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 4210412 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || |||||| |||| | || | |||||| | ||| || | | ||| | Sbjct 4210411 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCGCAAGGGTGATG 4210352 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| || || ||||| |||||||| Sbjct 4210351 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4210317 >seq247 Length=1816170 Score = 109 bits (120), Expect = 5e-19 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||||| || | || |||||||| ||||||||||| || || | |||| | Sbjct 1422559 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGACAGAGCGCGACCA 1422618 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || ||||||||||| || || | |||| |||||||| || || || ||||||||||| Sbjct 1422619 TCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGGTGCCCTCCTTG 1422678 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 | | |||||| |||| | || | |||||| | ||| || || | ||| | Sbjct 1422679 T-CTCGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 1422737 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| | || ||||| |||||||| Sbjct 1422738 GTCTTGCCAGTCAGGCTCTTCACAAAGATCTGCAT 1422772 >seq29 Length=10643064 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | ||| ||||| |||||||| ||||| || Sbjct 9522371 GCACCACCACGAAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTCA 9522430 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || ||||| || || || || || ||||| |||||| || |||||||| ||| Sbjct 9522431 GACAAAGTGCGCCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 9522490 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | || |||| || Sbjct 9522491 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATCGTATCCGAGGGTTCA 9522550 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || | || || || || || ||||| || ||||||||||| Sbjct 9522551 ACCTCGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACGAAAATCTGCAT 9522600 >seq62 Length=6495742 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || |||||||| ||||||||||| || | ||||| ||| || Sbjct 4413313 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGGCCATCCTC 4413254 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 |||||||| || || | |||| |||||||| || || || ||||||||| ||| Sbjct 4413253 CAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 4413194 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| |||| || |||||| | ||||| |||| ||| | || || Sbjct 4413193 GATTTTAGCTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTT 4413134 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||| || || || || |||||||| Sbjct 4413133 GCCAGTCAGGGTCTTCACGAAGATCTGCAT 4413104 >seq132 Length=3652367 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || |||||||| |||||||| || || | ||||| ||| ||| Sbjct 468654 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTTTAGTCTGAGAGAGTGCGGCCATCCTCT 468595 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 |||||||| || || | |||| |||| || || || || |||||||||||||| | Sbjct 468594 AGCTGTTTGCCCGCAAAAATCAGATGCTGATGGTCAGGTGGGATGCCCTCCTTGTCTTGG 468535 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| |||| | || | |||||| | ||| | || | ||| | | ||| Sbjct 468534 ATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAATCTCAAGGGTGATGGACTTG 468475 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || || ||||| |||||||| Sbjct 468474 CCAGTCAAGGTCTTCACAAAGATCTGCAT 468446 >seq395 Length=935364 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/230 (68%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | || ||||| ||||||| ||||| || Sbjct 144875 GCACCACC-CGAAGTCTCAACACAAGATGGACAGTGGACTCCGTTTGAATGTTGTAGTC- 144932 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || ||| || || || || ||||| |||||| || |||||| ||| Sbjct 144933 ---AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTCACTGATCAGGA 144989 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | || |||| ||| Sbjct 144990 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGCTCA 145049 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || || | ||||| || | ||||||||||| ||||||||||| Sbjct 145050 ACCTTGAGAGTAATGGTTTTCCCCATGAGAGTTTTTACGAAAATCTGCAT 145099 >seq374 Length=1022520 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | ||| ||||| |||||||| ||||| | Sbjct 479144 GCACCACCACGAAGTCTCAACACAAGATGAAGCGTGGACTCCTTTTGAATGTTGTAGTAA 479203 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || |||| || || || || || ||||| |||||| || |||||||| ||| Sbjct 479204 GACAAAGTGCACCCGTCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 479263 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| | | || ||||| | ||| | || |||| || Sbjct 479264 GGAATTCCTTCCTTATCCTGGGTCTTAGCCTTGACATTTTCTATCGTATCCGAGGGTTCA 479323 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || || || || || || ||||| | ||||||||||| Sbjct 479324 ACCTCGAGAGTGGTGGTCTTCCCCGTGAGGGTTTTCATGAAAATCTGCAT 479373 >seq5 Length=22519077 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || |||| || | ||||||||| | ||| | || ||||| |||||||| |||||||| Sbjct 15114134 GCACCACTACGAAGTCGCAACACAAGATGGACAGTGGACTCCTTTTGAATGTTGTAATCA 15114075 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || | || || || || || |||| |||||| || |||||||| ||| Sbjct 15114074 GACAGAGTACATCTGTCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGATCAGGA 15114015 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | || |||| | Sbjct 15114014 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTCCA 15113955 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || | || || || | || ||||| |||||||||||||| Sbjct 15113954 ACCTCGAGAGTGATGGTCTTCCCCATGAGGGTTTTCACAAAAATCTGCAT 15113905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475431531420960