Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq66 122 1e-22 seq88 104 3e-17 >seq66 Length=6061426 Score = 122 bits (134), Expect = 1e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | ||||| ||||||||| || || ||||| |||| ||| ||| Sbjct 2070536 TCACCTTTCACACCCATGGGAGTCGGGCAGTCATCAGCCACAGGAGGAAGAGCTCTGGTA 2070595 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| ||||||||||| ||||||||||| || ||||| || | | ||||| Sbjct 2070596 TAATAGGAGAGATTCGAAAAGGCTTCCCAGCTTTTATAGCCGTAGTGTGCATTGTACGTT 2070655 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || || |||||||||| || || |||||| Sbjct 2070656 GGTGGGCTGTCAATCAAATCTGATCTGGCT 2070685 Score = 100 bits (110), Expect = 4e-16 Identities = 195/286 (68%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 |||||| | || | |||| ||||| || || |||| | || || | || | | Sbjct 2068215 CCGGCATTTTGCTTGCTGAATGATTCGACAAACTGGGTAAGCCCATGTTCCATTAATAAA 2068274 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 ||||||||||| | || |||| || | |||| | ||| | ||| |||| ||| Sbjct 2068275 GAATTGTTGTAGAGAAACTGTTGATAGCTGTACTCCTGGTCATCAATGTGAAAGGTGTCA 2068334 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| || | ||||||| ||||||| || || ||||| || || || ||||| |||||| Sbjct 2068335 GGCAGAAGGGGATGCCAGTGGTAGAGAGTGTTAAACTCAGCAGCGATGCGGTTTTGGTAC 2068394 Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673 || || | ||| ||| || | ||| |||||||| | || | |||||| || || | Sbjct 2068395 TGGAATTGTTGGT--TGAAAAGCAGCTCTGGGTCAAACTTCAGTTTGAAGTGATAGCCAC 2068452 Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | | || || ||||| | | || | ||| ||||| ||||| || Sbjct 2068453 TCAAGTGTTGTACATAGTCTTCAATCACAATCTTAATCGTTTCTCC 2068498 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 10115 GTTCGCTCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGT 10174 |||| |||||||||||| |||| |||| | |||||||| ||||||||| ||| || Sbjct 2069904 GTTCTATCTTACCCCATGACCCAGTCCTTTAGTGAAAGCTGGTCCTCGCTTATGATCTGT 2069963 Query 10175 CCTAAAAAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTG 10234 | | ||||| || || || ||||| || | || || || ||||||| || |||||||| Sbjct 2069964 CTTGAAAAACTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCAAATTTGTGCCCTG 2070023 Query 10235 GGGATCGGGGATAAA 10249 |||||| || || || Sbjct 2070024 GGGATCAGGAATGAA 2070038 >seq88 Length=4696428 Score = 104 bits (114), Expect = 3e-17 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 || || || || || |||| || || | || ||||| || ||||| | ||||||||| Sbjct 4510332 GTGGCCGTCTTAACAATGTTGAAGCCCATCTCACCGCCAAATGTGCTTGACTTCCAGTAC 4510273 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 | || || |||||| | ||| | | ||| || || | |||||| |||||||| | || Sbjct 4510272 TCGGGAGAACAGATGGCATTCCCTAAGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCT 4510213 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTA 9111 || || ||||| || ||||||| ||| | || || | || | || || | ||| Sbjct 4510212 ATCATACTCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCAA-GAAGCAGTCCCGGGTA 4510154 Query 9112 GAGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTC 9171 || || | || || | ||| ||||| || | ||||| || || || ||||||||||| Sbjct 4510153 GAACTCCAAGGCATCAATGTCTCCATATAGCTCCTCCAATTCAGCTGCCATCTCCTTCTC 4510094 Query 9172 ACCTACAAG 9180 |||||||| Sbjct 4510093 TCCTACAAG 4510085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723622570923600