Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq139 96.9 6e-15 >seq139 Length=3560323 Score = 96.9 bits (106), Expect = 6e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | |||||| || ||||||| ||| || || || || | Sbjct 1652910 CCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCCGCAATAT 1652851 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||||| |||||||||||| || ||||||| | | || || ||||| |||| || Sbjct 1652850 GGATGTTCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATGTTGAGAA 1652791 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 |||| ||||| || || ||||| ||||| || Sbjct 1652790 TGGTTTTCTGAGAGATTTCCCATACCGTTTT 1652760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795039365766240