Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq10 152 6e-32 seq115 120 3e-22 seq139 102 9e-17 >seq10 Length=16450340 Score = 152 bits (168), Expect = 6e-32 Identities = 485/750 (65%), Gaps = 18/750 (2%) Strand=Plus/Minus Query 18612 TTAAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATT--CATTACTCCCATT 18669 ||| || ||| | |||| | |||||| |||||| | || | ||| ||| |||| Sbjct 11919884 TTAGAAGTCAGCGTCCAGGGTAAAAGAGTTCTCTG--TCGGACGTGGCATCACTTCCATC 11919827 Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 | ||||||||| | ||||| || |||||||| || || || | ||| ||| ||| Sbjct 11919826 CTCTGATATTCGCCCACTCTCTTCTCAAAGAAGTTCGTCTTCCTTTCTCGTGAAATATTC 11919767 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789 ||||| || ||||||||| ||| || | | || | || || | || | Sbjct 11919766 TCCATGAAGTCAAATGGACTTTCTATTCGGAAAACCTTGCTAAAACCCAGCTCCAGCCTG 11919707 Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849 |||||||| | || |||| ||| || ||||||| | |||||||| | || | Sbjct 11919706 AGTCTATCAGTCACGAATTCAATGTACCCCTTCATCAGAGTGCAATTCATCGCAATGACA 11919647 Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909 || || || | || ||||| || || || || ||||| || || | | || || Sbjct 11919646 TTCACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCCAACAGCGTTGGTGATGATC 11919587 Query 18910 GATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAAA 18969 | || || | || ||| || || || ||||| ||||||| || ||||| Sbjct 11919586 TCTTTCACCCTCTGCTCTGCAGGTTTGTGCAGCAGGTGTTTGAACATCAGGCAGGCAAAG 11919527 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 || || || | ||||| ||||| || ||| || || || |||| | ||||||| | Sbjct 11919526 TCTCAGTGCAAACCCTCATCTCTGCTACTCATTTGGTTGGAGAATG--AGGCCAGGCACC 11919469 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 || ||| ||| || | ||||||||| | ||||| |||| || ||||| Sbjct 11919468 AGGTCTCATTTCTTGAGCCAGAATATCGGCGCAAA-----------AGAAGATTCCTTCC 11919420 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTC 19149 |||| ||||| || || | | ||||||||| | || || || ||||| | Sbjct 11919419 ACTGTGGCAAACGCTACAACACGTTCTCCATAGGCGGTCTCTTTGTTCCTGATCCAACGC 11919360 Query 19150 AGTGCCCAATCAGCCTTCTTTTTTA-CACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 | ||||| ||| || | || || |||| ||||| ||||| | | || || || | Sbjct 11919359 AAGGCCCAGCCAGGCTGCCTTCTTGGCACAAGGCATCGTCTCCACGGCGTTGAAGAGCAA 11919300 Query 19209 CATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 | | || | | |||||||| | | || || | | |||||||||||| ||||| Sbjct 11919299 CTCCCTTTCCTTGGCATCTTTAATGTCAGTGTCAATGAGGAGACTGTACATTTCAGAATG 11919240 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || ||||| || || || || || | ||| ||||| | ||||| || ||||| ||||| Sbjct 11919239 GATGTTTTCCATGGCAATTTGGAAGCTGTAGAAACAGCGGGCTTCGGTGATCTGAACTTC 11919180 Query 19329 ACTACAAAATCTTTCGACCAAATTTTCATT 19358 | ||| | || ||||| || ||||| Sbjct 11919179 TTGGCTAAACCGCTCCACCAAGTTCTCATT 11919150 >seq115 Length=3908719 Score = 120 bits (132), Expect = 3e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044 || ||||| || || | |||||| ||||| || | ||||||||||| |||||||| ||| Sbjct 3778542 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3778483 Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104 ||||||||||||| ||| ||||| || || ||||| || |||||||| || ||||| || Sbjct 3778482 AACCAGAATATAGCAGCGAATGAGCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 3778423 Query 19105 ACTAGTCTTTCTCC 19118 || | ||||| || Sbjct 3778422 ACCACCCTTTCCCC 3778409 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/88 (82%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 19334 AAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATA 19393 |||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| | Sbjct 3773499 AAAATCTT---ACCAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAAGGCTAAGA 3773443 Query 19394 CATGTTTAATAAAATGTTTTTCATCTGA 19421 || ||||||| || |||||||| Sbjct 3773442 TGTGGGAGATAAAATACTTCTCATCTGA 3773415 >seq139 Length=3560323 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | |||||||| | || || || || ||||| ||||| || || Sbjct 1651053 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 1650994 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 ||||||||||| | ||| |||||||| || || |||||||| | |||| | ||| || Sbjct 1650993 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 1650934 Query 47448 TTTCTTACTCCATA 47461 ||||||| ||||| Sbjct 1650933 TTTCTTATACCATA 1650920 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| || ||||| ||||||||||| | ||| ||| |||| || | |||||| || | Sbjct 1652904 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCCGCAATATGGATGT 1652845 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | | ||| || || |||||||| || |||||||| || |||||||| | | ||| Sbjct 1652844 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATGTTGAGAATGGTTT 1652785 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 | || | || |||||||| |||||||||| || || | ||| || || Sbjct 1652784 TCTGAGAGATTTCCCATACCGTTTTATAAAGCTGCTTCAGGTCATCAGG 1652736 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 || || | ||| || | || ||||| ||||| ||||||| |||| || | | || Sbjct 1623627 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 1623568 Query 48660 TATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAAC 48719 |||||||||||| ||| ||| ||||| || || || || | |||||| | ||| ||| Sbjct 1623567 TATGTTTCAATAGCAGCATCGATATCTTCTTCGTGAATCCCCACAGATACCCTCATCAAC 1623508 Query 48720 ATATATTGAGGTCTTTCA 48737 |||| ||| ||||||||| Sbjct 1623507 ATATGTTGTGGTCTTTCA 1623490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562026914800560