Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq402 141 8e-29 seq1 82.4 6e-11 >seq402 Length=911058 Score = 141 bits (156), Expect = 8e-29 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || ||||||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 128709 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 128650 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || ||||||||||| | ||||||||||| ||||| || || ||||| |||| | Sbjct 128649 ACACCTAGCCCCATGTCGGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 128590 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCAT 30029 ||||| ||||| || | || ||||| ||||| || ||||| Sbjct 128589 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCAT 128549 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||| || |||| ||||| || |||||||||||||| || || || || || || | || Sbjct 126301 CATATCTTTGTAGTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATC 126242 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 ||| |||| ||| ||| ||| ||||||| ||||| | ||| || |||||||| Sbjct 126241 TCCTTCTTTTCTGCTGGAGAATCCCAGGTTGTCCAGGAAGTCACGGGACCCATTGGCGTC 126182 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 |||||| | || ||||| || || ||||| | |||||||| || Sbjct 126181 CCAGATTCTCACTCCCTTGGACGACAGTTCTTTAGCATTTGTGGATCC 126134 >seq1 Length=64990205 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || || || || ||||| |||| || |||||||| | | ||| | |||||| | ||| Sbjct 35302698 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGCCGATTCTTCTTGGGA 35302639 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCT 112201 ||||||||||| ||||| |||||||| ||||||| |||| Sbjct 35302638 ATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCT 35302599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408559562765342