Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq273 86.0 5e-12 seq166 84.2 2e-11 >seq273 Length=1654702 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||||||||| ||||| | ||||| || || || ||| | | |||| ||| Sbjct 952635 ACCAATTGAAGGGTAGACTCTTTCTAAATATTATAGTC--TGAGAGTGCAGTCATCCTCC 952692 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || || || || ||| |||| || || || || ||||| ||||| || || ||||| Sbjct 952693 AACTGTTTGCCCACAAGAATCAGACACTACTGGTCAGGCGGGATGCCCTCCTTGTCTTGG 952752 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| ||| ||| | ||| |||||| | || || | || |||| || ||| Sbjct 952753 ATTTTAGCTTTGACATTCTCTTTGGTGTCACTGGACTCAACCTTGAGGGTGATGGTCTTG 952812 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| ||||||| Sbjct 952813 CCAGTCAGGGTCTTCACAAAGTTCTGCAT 952841 >seq166 Length=2973255 Score = 84.2 bits (92), Expect = 2e-11 Identities = 131/188 (70%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||| || || || ||||| || ||||| || | | ||| | || Sbjct 2554550 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCGTCT 2554491 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||||||||| || ||||| |||| | || ||||| || ||||| ||||| ||||| Sbjct 2554490 TCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 2554431 Query 101378 TGAATTTTTTGTTTTAC------AATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431 || || || |||||| | |||||| || ||||| | ||| || | |||||| Sbjct 2554430 TGGATCTTGGCTTTTACTAGTATATTTTCTATCGTATCAGAGGGTTCAACCTTGAGAGTG 2554371 Query 101432 ACCGTTTT 101439 | ||||| Sbjct 2554370 AGGGTTTT 2554363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396222115340478