Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq630 185 2e-41 seq410 111 3e-19 seq169 91.5 3e-13 seq139 84.2 4e-11 >seq630 Length=400365 Score = 185 bits (204), Expect = 2e-41 Identities = 189/245 (77%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 241385 AGCTGCTGACAGCCTTGGC--ACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCT 241442 ||| |||| ||||| | || ||||| | || ||||| ||||||||| |||||||||| Sbjct 92415 AGCAGCTGGCAGCCGTTGCTGACATGGGTCAT--GACCTTCTGTTTGAGCTGGGCCACCT 92358 Query 241443 GGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCA 241502 | ||||| || ||| || || || || || || ||| || | ||||||| ||||| Sbjct 92357 GCTCCCGGAGGACGCCGGCAGTGTTCGAGAGCCCCAGGTTCTCGGCCTTGAGCGTCTTCA 92298 Query 241503 CTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCA 241562 | || |||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| Sbjct 92297 CCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCA 92238 Query 241563 AGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCG 241622 |||||||| || | ||| || ||| | |||||||| |||||||| ||||||| ||| | Sbjct 92237 GCCGGTTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCCTGGTCTTCCATGTTGATGG 92178 Query 241623 GAGAC 241627 ||||| Sbjct 92177 GAGAC 92173 >seq410 Length=980372 Score = 111 bits (122), Expect = 3e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || | ||| || || ||||||||||| ||| |||||||| | || | || ||| Sbjct 303769 TCATCTCTGCTAATAAGTTCGTTGGAGAAGGTGAGGCCAGGCATCAGGCCTCGCTTCTTG 303710 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||||||| || | |||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 303709 AGCCAGAAGATCGACGCGAAAGAGCCGGAGAAGAAGATTCCCTCCACTGCGGCGAACGC 303651 >seq169 Length=2920331 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 |||||||| ||||||||||| ||||| | ||||| || | ||||| |||| ||| Sbjct 1819140 TTCACTTTTTCCTCCAGCCGGGCGATTCTCTCCAGCTTCCTTTTCCGGCACTTGGAGGCA 1819199 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | | ||| | ||||||||||| || |||||| |||||||||| Sbjct 1819200 GCGATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGAACTCCATGTCG 1819259 Query 241619 ATCGGAGA 241626 || || || Sbjct 1819260 ATGGGGGA 1819267 >seq139 Length=3560323 Score = 84.2 bits (92), Expect = 4e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 213540 ATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG 213599 || || |||||||||||||||||| ||| || ||||||||||| || || ||| | Sbjct 1635795 ATTTCTGTGCACAGGTTGCTGCATTTGATTGTTCCCAGGTTCTGCTGATTGCTCTTCCGG 1635736 Query 213600 TTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650 || ||||| |||||||||||||| |||| || |||||| ||| ||| Sbjct 1635735 TTACAGGAATCTTTGTAGAGCATGTATGGGGTACCTGTCTCTGTCTGAGAC 1635685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931397098959360