Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq32 349 4e-91 seq138 158 1e-33 seq162 109 6e-19 >seq32 Length=9580343 Score = 349 bits (386), Expect = 4e-91 Identities = 670/984 (68%), Gaps = 9/984 (1%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 |||||| || |||| ||| |||| ||| || | ||||| ||| ||| || ||||| || Sbjct 5093838 CAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCAATGTCCATGTCAAACTTATTGGC 5093779 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 ||||| ||||| || | || ||||||| || ||| || | || || || || || Sbjct 5093778 AAACAGGTGGTGC---TTGCGCAGTATCCAGTTCAAGTCACCTGCTCCAAAAACACACAC 5093722 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 ||| || | |||||| |||||||| || || || | || || || ||||||||||| Sbjct 5093721 GGAGCGCACGTGCACCCCGTTGCAGGGTGGATAGGGTGCGCCCTTGTAAACGTCACCTTC 5093662 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 |||||||||| || |||||||| || || || ||||| ||||| ||||||| || | Sbjct 5093661 AAAGTACTGCCATTTGACAAACCTAGCAATTGCTTGCATATCGGACATGTCGTACTTATG 5093602 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | | || || || | || || | ||| | |||||||| || | || Sbjct 5093601 ACTTAAGGACAGTGAGCCAGGGACTTCAGGGATCCTCTGAATAGTGGCCCAGAGATACTC 5093542 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 || ||||| || ||||| || | ||| ||||| |||| |||| | | || Sbjct 5093541 ATCCGGGCTATATGTGTCTTTCGCCCACTCCATAAACTTCTGGATTTTTTCATTCTCTAG 5093482 Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471 |||| ||||| ||| | || || || || || ||||| || || | || | Sbjct 5093481 CACGTACTCTACGTACTTCCTGCTGACCACGAAATAGGCACTGCCCGAAAACAGAGGCGT 5093422 Query 160472 GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCGC 160531 | ||| || ||||||| || || || | || | ||| | ||||| | | Sbjct 5093421 TTCAAGAGGAGGTTGCACTTTGTCAGTCCCCGTATTTGTCAGCTTTCCATCCACCACCTC 5093362 Query 160532 GTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGTT 160591 | |||| |||||||| | | || || | |||||| | ||||||||||| |||| Sbjct 5093361 ATAGTGCTTTTTCCACCTTTCTTTTTTATGGGATGGCATTCTCTCCGTCTCTAGGTTGTT 5093302 Query 160592 GGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTC 160651 | || | || || || |||| | |||| || || ||||| || || | ||||| || Sbjct 5093301 TTCTCCCACTAGTGACTTGAGCTTCCTGACAATTTCCAGGTTGGTTTTAATAGGAAAATC 5093242 Query 160652 GGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCAT 160711 | ||||| | ||| |||| ||||||||| ||| | | ||| ||||||| ||| Sbjct 5093241 CATGCCGCAGAGGTTGATCAGGTACTTCCAGCCTGCGTTTCTTTTGTGGAGGTCCCGCAT 5093182 Query 160712 GCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACT 160771 || || | || ||||| || || ||||| || |||||||| || |||| || | ||| Sbjct 5093181 ACAGTTGAGGTCGGCCTGGACCCGACTCCACGATGCGTACACCACAGTCTCCAGCTGACT 5093122 Query 160772 GGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAACAT 160828 |||||||||||||||| |||||| || | || || |||| | ||||| ||| | || Sbjct 5093121 GGCCACAAAGACGTTACTGAAACAGGATGCAATGCCAGTCACCGCGGCCAGGAAGGA-AT 5093063 Query 160829 CTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCT 160888 | |||| || ||||||||| | |||||| | ||||||||| |||||||||||| Sbjct 5093062 C--CTCCGATTTCTTGTCCACGTGAATGCAATAGAAATTCTGAGGCATGTAGATGGCCCT 5093005 Query 160889 GAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAA 160948 || | ||| || ||||| || || || ||||| | || || || || ||||| ||||| Sbjct 5093004 CAGGAGCCTGTCAAACATTTCAATTTTGTGATGAACGACTATGGAATATGCTATTGGAAA 5092945 Query 160949 CTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAATC 161008 ||| | ||| || | || || | | | ||| || || ||||||| ||| || Sbjct 5092944 CTCTGCCTCTTCCCTGCTAAGAGGTTCTACAATGTATTTGCGTCTCTTGATGAAAGAAGT 5092885 Query 161009 ACAATCCCGCGTCATGTTGATATA 161032 ||||| | |||||||| || || Sbjct 5092884 GCAATCACTAGTCATGTTTATGTA 5092861 >seq138 Length=3617779 Score = 158 bits (174), Expect = 1e-33 Identities = 225/317 (71%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212 || || | ||| | | |||| || ||||| || || ||||| || |||||||| ||| || Sbjct 2232564 AGGGTGAGGCAGGCTATTCCTGACATCTTCCCGGAACCGAAGGTATTGAAGAGACACTTG 2232505 Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272 | || ||||| || |||| ||||||||||| || || | |||| ||| | || ||| Sbjct 2232504 TAACACCCTTCATCGTCCAGAGTGGTATTCCAGAAGGTGATGGTTGTGTTCTGAAGTCCC 2232445 Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332 | || |||||||||| ||| ||||| | ||||| || || || || || | || | Sbjct 2232444 AGCTCAGTTATGTTCATCTTATCCTTATAGGCGGGTTGGACCACGACCCCATGCTCCTTG 2232385 Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGA 168392 ||||| ||| ||||||| || ||||| | ||||| || |||||||| || || || | Sbjct 2232384 CTGAAAGTGACCATGTTTTCTGGGCTTGAAGCCTTCATTTTCTGCCATGTCACAATAACG 2232325 Query 168393 ACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGC 168452 || || | || | |||| | |||| | ||||| || ||||||||| | | | Sbjct 2232324 ACTTCCTGGGGAGTTTCCAGGAAGCATCGTAAAGAAGCAGGTGTGTTCAGCGGCTGTTTT 2232265 Query 168453 TCATCTTGAGTTACGAC 168469 |||||||| || || || Sbjct 2232264 TCATCTTGGGTCACCAC 2232248 >seq162 Length=3060309 Score = 109 bits (120), Expect = 6e-19 Identities = 143/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| ||| |||| |||| ||| |||| |||||| | ||||| || |||| || || | Sbjct 345212 AGATACTTTGCTAGCTCACTTGGAGAGTTATAATCTTCCACATGAATGAATGAGTCTGCT 345153 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 ||||| || |||||||| |||| || || || || | || || ||||||| | || Sbjct 345152 GGAATATAATTTTCATAGTTTTCCCTAGATGGCCCCAGGACAATAGGTACGGAGCCAGCC 345093 Query 176352 AATAATGAGCG--GTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAG 176409 | | |||| ||||| |||||||| |||||| || |||| ||||||||||| || | Sbjct 345092 AGAA--GAGCATTGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCGAAGG 345035 Query 176410 CTAAATAGAACTTACA 176425 | || || ||||| Sbjct 345034 AAAGGTAAAATTTACA 345019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577135113593040