Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq139 91.5 2e-13 seq410 87.8 2e-12 >seq139 Length=3560323 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | || ||| | | || ||||| ||||| || || ||||| ||||| ||||| | Sbjct 1635666 TTTGGTATGCGATTATTGAGTCTCAGACAGAGACAGGTACCCCATACATGCTCTACAAAG 1635725 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 || | |||||| |||||| || || |||| ||||||||||||| || || || | Sbjct 1635726 ATTCCTGTAACCGGAAGAGCAATCAGCAGAACCTGGGAACAATCAAATGCAGCAACCTGT 1635785 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 |||| ||||| |||| || || || |||||| Sbjct 1635786 GCACAGAAATAGTAGAATATACCAGCAAAGATGAG 1635820 >seq410 Length=980372 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGG 65159 |||||||| |||||||||||||| || ||| ||| | || | ||| | |||||||| || Sbjct 303663 GTGGAGGGAATCTTCTTCTCCGGCTCTTTC-GCGTCGATCTTCTGGCTCAAGAAGCGAGG 303721 Query 65160 TCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGG 65209 || ||||| ||||| |||||| || ||||||||| | ||||||||| Sbjct 303722 CCTGATGCCTGGCCTCACCTTCTCCAACGAACTTATTAGCAGAGATGAGG 303771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596482694723520