Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq691 91.5 4e-13 seq465 87.8 5e-12 >seq691 Length=329812 Score = 91.5 bits (100), Expect = 4e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || |||||||| || || || || |||| || ||||| ||||| Sbjct 215289 ACCAGTCTCAGCAGTCTTGACAGCTGTGTCGATGAGCCCTTCACGCCCGCCCATGGCATG 215230 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 ||| || | ||| ||| || || | | ||||| |||| || || ||||| Sbjct 215229 GAAAAAGAACTCGGTGGGTGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCACGGCT 215170 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||||||| || ||| |||| | ||||| ||||| |||| || || | || | || Sbjct 215169 CTCGGGCCCATAGTCATCCTTGATGAAGTGGGGCAGAGTCCGGTGCTTGAATCCAAACGG 215110 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816 ||| ||||| || || ||||||||||| || Sbjct 215109 GATCCGCTTGCCCTCCACGTTCTGCTGCCC 215080 >seq465 Length=854003 Score = 87.8 bits (96), Expect = 5e-12 Identities = 172/252 (68%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 251413 CCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTG 251472 ||||| ||| || ||||| || ||| | ||| ||||| ||| | || | || | Sbjct 297189 CCACAAAGATTGCAAACATGAACCTGGTAGGGATCTGATGCCTCAAACAGTCTCTCCCTT 297248 Query 251473 GTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGA 251532 ||| | | ||| ||||| | |||| ||| || || ||||||||||| ||||| || Sbjct 297249 AAGAACTGGGCTGCCCCGTGGGCAATCTGACAGTCTCGTTCCATTTCACCAAAACGCAGG 297308 Query 251533 CCACCATCGCGAGCCCTACCCTC----GGCAGGCTGACGAGTGAGATTAACCATAGGACC 251588 |||||||| || | |||||||| ||| | ||| || || | ||| ||| || Sbjct 297309 CCACCATCCCGGGATCTACCCTCCATGGGCTGTCTGTTAAG-GATCTGAAC---AGGCCC 297364 Query 251589 GATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGG 251648 | | ||| ||| ||| |||| ||||||||||| | ||||||||| | | ||| Sbjct 297365 CCTAGCACGGGAATGGATCTTGTCATCCACCATATGCTTCAAGCGCTGGTAGTAAGTGGG 297424 Query 251649 ACCGATGAAGAT 251660 |||||||| || Sbjct 297425 GCCGATGAAAAT 297436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471597832795398