Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq1763 86.0 6e-12 seq8349 84.2 2e-11 >seq1763 Length=42512 Score = 86.0 bits (94), Expect = 6e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||||||||| ||||| || || ||||||||||| ||||||| ||||| |||||| Sbjct 41275 TCCTCTGGAAGGTCCCGTCCAGCGCAGCCACGATGACCGTCTTCCCGGCGTTGGCCATGG 41216 Query 43927 CCTCGCAGAACTCCACTAGGTC 43948 ||||| ||||||||| | ||| Sbjct 41215 TCTCGCTGAACTCCACGATGTC 41194 >seq8349 Length=7000 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 6515 TCCACGGCACGC-TGGCGACCACCCGCGGGTCGGTGGAGTTGCTGTCGAAGCGGACGATC 6573 |||||||| | | |||| ||| || ||||| | || || ||||||||| || |||| | Sbjct 6448 TCCACGGCGCCCGTGGCT-CCATCCTCGGGTTCGGGGCGTCGCTGTCGAACCGCACGAAC 6506 Query 6574 TCCGTGTCGTCCACGTAGCCCACGACCAGGTACCGGGG 6611 | |||||||||||||||||| |||| ||||||||||| Sbjct 6507 TGCGTGTCGTCCACGTAGCCGACGAGGAGGTACCGGGG 6544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475972252639920