Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq8 199 3e-45 seq586 145 6e-29 seq148 125 5e-23 seq685 107 1e-17 seq330 95.1 9e-14 >seq8 Length=20299087 Score = 199 bits (220), Expect = 3e-45 Identities = 935/1471 (64%), Gaps = 24/1471 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 ||||| | |||| ||||| || || ||||||||||| | |||||| || |||||||| Sbjct 19977258 TTATCCACAGCAGAGACATTGAGGATGCCATTGGCATCAATATCAAAAGTAACTTCAATC 19977317 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 ||||| || || | | ||||| | || ||| | | ||| | || || || Sbjct 19977318 TGAGGAACACCACAAGGTGCAGGATGTATGCCTGTGAGTTCAAACTTGCCAAGCAGGTTG 19977377 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 ||||| || || | | ||||| ||| ||| ||||| || | | || || Sbjct 19977378 TTATCCTTGGTCATGGCACACTCACCTTCGTAAACCTGGATGAGCACCCCGGGCTGGTTG 19977437 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAAT 281655 || | || || || || |||| || | || || || || ||||| | || Sbjct 19977438 TCACAGTAGGTGGTGAAGG-TCTGCATCTGCTTGGTGGGGATGGTGGTGTTGTGCTTGAT 19977496 Query 281656 AATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAAC 281715 | ||||| || || ||||| | || | |||||| |||| ||| |||||||| | Sbjct 19977497 CAGGACAGTCATGATGCCGCCAGCCATCTCAATACCAAGGGAAACAGGTGTGACATCCAG 19977556 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGC 281775 || | | || ||| | |||||| | | ||| ||||| ||||| || | ||| Sbjct 19977557 CAGCAGCAGATCTTGGACATTTTCAGATTTGTCTCCAGAGAGAATGGCTGCCTGGACAGC 19977616 Query 281776 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 281835 |||||||| | ||||| |||||||| || | | | ||| | ||| |||||||| Sbjct 19977617 TGCACCATAAGTGACAGCCTCATCAGGGTTGATGCTCTTATTCAACAATTTTCCATTGAA 19977676 Query 281836 AAAATTTGAAAGAAGTTGTCTTACCTTAGGA-ATACGAGATGATCCTCCAACTAATACAA 281894 || | || |||| ||| | | ||| ||||||| || || || || | |||| Sbjct 19977677 GAAGTCCTGTAGGAGTT-TCTGAATCTTGGAGATACGAGTAGAGCCACCCACCAGGACAA 19977735 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 281954 | ||||| | ||| || || || || || | |||| | | |||| || || || || | Sbjct 19977736 TATCATGGATCTGGGACTTGTCAAGCTTGGCATCCCAAAGGGCTTTCTCTACAGGGTCCA 19977795 Query 281955 GACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 282014 | | | || ||||| | | | || ||| ||| || || | || | || Sbjct 19977796 GGGTGCCACAGAAAAAGTCAGCATTCAATTATTCAAATCAGGCATGGGTGATAGAGGTAT 19977855 Query 282015 TATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATA 282074 | || |||||||| | | ||||||| ||||| | | || || ||||| | Sbjct 19977856 AGAAGTCGATTCCTTCATAGAGTGAATCAATCTCAATACTGGCCTGGGTGCTGGAAGAGA 19977915 Query 282075 GTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC----TTTTGCTGAT 282130 | | | | |||| || |||||| | || | || | | | || || | || | Sbjct 19977916 GAGTATGCTTAGTACATTCACAACCAGTACGAAGGCGACAGACAGCCCTCTTGTTCTCAC 19977975 Query 282131 TGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGAC 282188 |||| ||| | |||| || ||||| | | ||| | ||| | || | | Sbjct 19977976 TGAT----ATCCTTCTTATGCTTGTGTTTGAACTATGCAATGAA--ATGGTTGACCATTC 19978029 Query 282189 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 282248 || || || |||| || || || | || | || | ||| | | || | || | Sbjct 19978030 AGTTGTCGAAGCCTTCTCCACCTAAGTGGGTGTCCCCAGCTATAGATTTGACCTCAAAGA 19978089 Query 282249 GTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAA 282308 ||||||||||| | | | | ||||| || ||||| |||| ||||| || | Sbjct 19978090 TTCCATCTTCAACTGTAAGGATTGAGACATCGGAAGTGCCACCTCCCAAGTCAAAGATCA 19978149 Query 282309 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 | ||||| |||| | ||||| || | | || |||| |||||||||| ||| Sbjct 19978150 GCACATTTCTTTCAGCTCCAACCTTTTTGTCTAAATTGTAAGCAATAGCAGCAGCAATTG 19978209 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | ||||| || ||||| | ||||| ||||||||||| |||| |||||||| ||||| | Sbjct 19978210 GCTCATTGATGATTCTAAGTACATTGAGACCAGCAATAGTTCCAGCATCTTTGGTGGCCT 19978269 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTC 282488 | || || || || | || ||||| || || | ||| |||| || | || | Sbjct 19978270 GATGCTGAGAGTCATTGCAGTAAGCAGGTACTGTGACAACAGCATTGGTATCAGTCTTCC 19978329 Query 282489 CAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTG 282548 ||| || || || ||| ||||| || | |||| ||| ||||| | | ||||| Sbjct 19978330 CAAGGTAGGCTTCTGTGATTTCCTTCATCTTTGTCAAAACCATGGATGACACCTCTTCTG 19978389 Query 282549 GAGAATATTGCTTGGATTCATT---TTGATATGATACTTCAAAATATGGTTTATTACCAA 282605 || || | |||| || | ||| ||| ||||| | | || | | || Sbjct 19978390 GATAAAA--GCTTTTTGTCTCTCCCTTG-TATTCTACTTGGACCTTGGGCCTGCCAGCAT 19978446 Query 282606 CATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 282665 |||| | || | || ||||||| ||| | || || |||||| ||| | |||| Sbjct 19978447 CATTCACCACCATGAAAGGCCAATGCTTCTTGTCAGACTGAACAACAGCATCA-TCAAAT 19978505 Query 282666 CTCT-ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGA 282724 || | ||||| || | || |||||||| | || ||||| ||||| | ||| ||||| Sbjct 19978506 CTATGTCCAATCAAGCACTTGGCATCAAAGACCGTGTTGGTAGGATTCATTGCTACTTGA 19978565 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 282784 | || || ||||| ||||||| |||| || || ||||| | |||||| || || Sbjct 19978566 TTCTTTGCAGCATCACCAATCAATCGTTCAGTATCAGTAAAGGTAACATAACTCGGGGTG 19978625 Query 282785 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACA 282844 || || || || |||||||| ||||| ||||| ||||| |||| || ||| ||| ||| Sbjct 19978626 GTTCGGTTTCCCTGATCATTGGCAATTATTTCCACTTTTCCATGCTGGAATATACCCACA 19978685 Query 282845 CAACTAAAAGTTGTTCCTAAATCAATACCAA 282875 ||| | || | || | |||||| |||| Sbjct 19978686 CAAGAGTAGGTGATGCCAAGATCAATGCCAA 19978716 >seq586 Length=468746 Score = 145 bits (160), Expect = 6e-29 Identities = 426/645 (66%), Gaps = 20/645 (3%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| || || ||||||| | || | || | ||| || | || | |||| Sbjct 79278 TTGTCAAAGTCCTCCCCTCCCAGGTGGGTGTCCCCGGCCGTGGCCTTCACCTCAAAAATC 79219 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||||| || | | || | | |||||| || || ||||||| |||||| || || Sbjct 79218 CCATCATCTATGGTCAGGATGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAGG 79159 Query 282311 ACAT-TCATTT-CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 || | || | | || | || ||| | | ||| ||||| |||| |||||||| |||| Sbjct 79158 ACCTGTCGCTCGCCCTGACCTGCTTTATCT-AAG-CCATAGGCAATGGCAGCAGCTGTTG 79101 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 ||||||| |||||||| | ||||| ||||| ||||| |||||||| || ||||| | Sbjct 79100 GTTCATTGATAATTCTTAGCACATTGAGACCTGCAATCACGCCTGCATCCTTGGTGGCCT 79041 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCT---- 282484 | | ||| || || || ||||| || || ||||| || || || ||| || | Sbjct 79040 GGCGTTGAGAGTCATTGAAATAGGCTGGCACAGTGATCACAGC----GTTGCTGATGGGA 78985 Query 282485 TTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 282544 | || | | |||| || || | ||||| ||| | | | ||| || || |||| | Sbjct 78984 TGGCCCAAAAAAGCCTCAGCAGTCTCCTTCATCTTAGTCAGCACCATAGAGGAGATTTCT 78925 Query 282545 TCTGG--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAA--TATGGTTTATT 282600 || || |||| | || | | |||| || ||||| ||| | | || || | Sbjct 78924 TCAGGGTAGAA-AGCCTTTTTCTCCCCTTTG-TAGGATAC--CAATACTTTGGGCTTGCT 78869 Query 282601 ACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATT 282660 || || | || |||| ||| ||||| ||||||||||||||| || | ||||| Sbjct 78868 TCCTTCACTGATTACTTGAAAAGGCCATAGTTTCATATCTGATTGTACTACAGGATCATT 78809 Query 282661 AAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGC 282720 ||| | ||| ||||| | ||||| |||||||| | ||| || ||||| | || | Sbjct 78808 AAATTTTCTGCCAATCAGGCGTTTGGCATCAAAGACAGTGTTCTGAGGATTCATGGCTAC 78749 Query 282721 TTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGG 282780 || | ||||| ||||| || || || | || || || || || | || || || Sbjct 78748 CTGGTTCTTGGCCGCATCCCCGATGAGCCGCTCGGTGTCGGTGAAGGCCACGTAGCTGGG 78689 Query 282781 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACC 282825 || ||||| || || || || || ||||| || || || || || Sbjct 78688 GGTGGTGCGGTTGCCCTGGTCGTTGGCAATGATCTCCACCTTGCC 78644 >seq148 Length=3185096 Score = 125 bits (138), Expect = 5e-23 Identities = 526/821 (64%), Gaps = 22/821 (3%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| || || || || ||||||||||||||||| | || | Sbjct 560656 GTCATGACGCCACCAGCCGTCTCAGTGCCGAGTGAAAGAGGAGTGACATCCAGCAGCAGC 560715 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || ||| | |||||| | | ||| ||||| ||||| || | ||| |||||| Sbjct 560716 AGATCTTGGACATTTTCAGATTTATCTCCAGAGAGAATGGCTGCCTGGACAGCTGCACCA 560775 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || | ||||| |||||||| || | | | ||| | || ||| |||||||| || || Sbjct 560776 TAAGTGACAGCCTCATCAGGGTTGATGCTCTTATTAAATTCTTTTCCATTGAAGAAGTTC 560835 Query 281843 GAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 281901 | || | || ||| | ||| | ||| | | || || || || || ||| | ||||| Sbjct 560836 TATAGGAATT-TCTGAATCTTGTGGATATGGGTGGAGCCACCCACCAAGACACTATCATG 560894 Query 281902 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGC 281961 | ||| || || || || || | | || | |||| || || || || | | Sbjct 560895 GATCTGGGACTTGTCAAGCTTGGCACCCTGAAGGGCTTTCTCTACAAAATCCAGCGTACC 560954 Query 281962 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 282021 | || || | | | |||||| ||| || || | |||| || | || Sbjct 560955 ACAGAAATGATCGGTATTCAATTCTTCAAATCAGGCATGGGTGATAGTGGTATAGAAGTC 561014 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 282081 |||||||| | | |||||||| ||||| | || || ||||| || | ||| Sbjct 561015 GATTCCTTCATAGAGAGAATCAATCTCAATACGGGCCTGGGTGCTGGAAGAGAGAGTACG 561074 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC----TTTTGCTGATTGATTCA 282137 |||||||||||||| || || | || || | || || | || | ||| Sbjct 561075 CTTAGCACGTTCACAAGCAGTACGAAGGTGACGGACAGCCCTCTTCTTCTCACCGAT--- 561131 Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATC 282195 ||| | |||| || | ||||| ||| ||| | ||| | || | | || || Sbjct 561132 -ATCCTTCTTATGCTTGCGTTTGAACTCTGCAATGAA--ATGGTTGACCATTTGGTTGTC 561188 Query 282196 AAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATC 282255 ||| ||||| || || || | || | || | |||| | | || | || | |||||| Sbjct 561189 AAAGTCTTCTCCACCTAAGTGGGTGTCCCCAGCTGTAGATTTGACCTCAAAGATTCCATC 561248 Query 282256 TTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 282315 ||||| | | | ||||| || ||| | |||| ||| | || || ||| Sbjct 561249 TTCAACTGTGAGGGTTGACACATCGAAAGTGCCATCTCCCAAGTCAGAGATGAG--CATG 561306 Query 282316 CATTTCTTTG---TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 ||||||| || ||||| || | ||||| |||| ||||||| || |||| || Sbjct 561307 --TTTCTTTCAGCTCCACCTTTTTGTCTAAACCATCAGCAATAGCAGCAACA-TTGGATC 561363 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||| || ||||| | ||||| ||||||||||| |||| |||||||| ||||| || | Sbjct 561364 ATTGATGATTCTAAGTACATTGAGACCAGCAATAGTTCCAGCATCTTTGGTGGCCTGACA 561423 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || || || || || || ||||| || || | ||| |||| Sbjct 561424 CTGAGAGTCATTGAAGTAAGCAGGTACTGTGACAACAGCAT 561464 >seq685 Length=348207 Score = 107 bits (118), Expect = 1e-17 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||| || |||| |||||||||||||| ||||| || ||||| | ||| Sbjct 296888 TTTTTGTCTAAACCGTAAGCAATTGCAGCAGCAGTTGGCTCATTGATGATTCTAAGTACA 296829 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||||||||| |||| |||||||| ||||| || | || || || || || || Sbjct 296828 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTGGCCTGACGCTGAGAGTCATTGAAGTAA 296769 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 ||||| || || | ||| |||| Sbjct 296768 GCAGGTACTGTGACAACAGCAT 296747 >seq330 Length=1286678 Score = 95.1 bits (104), Expect = 9e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 || || || ||| |||| |||||||| ||||||||||| || ||| | || ||||| | Sbjct 1061982 TGCACACTTATTCTGACTGAGGGAGACTCAGCTAAAACCTTGGCTGTTTCAGGCCTAGGT 1061923 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||| ||||| | || || |||||||| |||||||||||| | | |||||| | Sbjct 1061922 GTGGTTGGGAGAGACAAGTACGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 1061863 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 1061862 GAAGCTTCTCATAAA 1061848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740058237849804