Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq5750 95.1 1e-14 seq1765 89.7 5e-13 seq5 82.4 7e-11 >seq5750 Length=9448 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || ||||| || |||||||| ||| || |||| | |||||| || || || || Sbjct 8574 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCG 8633 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || ||||||| || ||||| || || || ||||| |||||||| || || || Sbjct 8634 GCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 8693 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| |||| || || || | || | |||||||||||||| ||| Sbjct 8694 ACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTT 8753 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 8754 TTCACGAAGATCTGCAT 8770 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || ||||| || |||||||| ||| || |||| | |||||| || || || || Sbjct 7890 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCG 7949 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || ||||||| || ||||| || || || ||||| |||||||| || || || Sbjct 7950 GCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 8009 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| |||| || || || | || | |||||||||||||| || Sbjct 8010 ACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 8069 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 8070 TTCACGAAGATCTGCAT 8086 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || ||||| || |||||||| ||| || |||| | |||||| || || || || Sbjct 8346 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCG 8405 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || ||||||| || ||||| || || || ||||| |||||||| || || || Sbjct 8406 GCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 8465 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| |||| || || || | || | |||||||||||||| || Sbjct 8466 ACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 8525 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 8526 TTCACGAAGATCTGCAT 8542 >seq1765 Length=41513 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || ||||| || |||||||| ||| || |||| | |||||| || || || || Sbjct 9416 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCG 9475 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || ||||||| || ||||| || || || ||||| |||||||| || || || Sbjct 9476 GCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTG 9535 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| |||| || || || | || | |||||||||||||| || Sbjct 9536 ACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 9595 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 9596 TTCACGAAGATCTGCAT 9612 >seq5 Length=22519077 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 ||||| || | ||| | || || || ||||| ||||||||||| || || | | Sbjct 15114119 CGCAACACAAGATGGACAGTGGACTCCTTTTGAATGTTGTAATCAGACAGAGTACATCTG 15114060 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| ||||| || ||||| ||||||| | ||||||||| ||||| || ||||| || Sbjct 15114059 TCTTCCAGTTGCTTGTCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 15114000 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || || || |||| | ||| | || || | |||| | || || | ||| | Sbjct 15113999 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTCCAACCTCGAGAGTGATG 15113940 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||| || | | ||||| || || || ||||| Sbjct 15113939 GTCTTCCCCATGAGGGTTTTCACAAAAATCTGCAT 15113905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488472831352800