Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq512 95.1 1e-14 >seq512 Length=596889 Score = 95.1 bits (104), Expect = 1e-14 Identities = 182/264 (69%), Gaps = 21/264 (8%) Strand=Plus/Minus Query 1502 GGAGAGAGCGAG-GCCGCC-GCTTTGGCAACAGCTGCTAGAGTGAGATGTGCTCGCTATA 1559 || ||||| ||| | ||| |||| |||||||||||| ||| ||||||| |||| || Sbjct 397892 GGTGAGAGGGAGCGGAGCCTGCTTCAGCAACAGCTGCTTGAGCCAGATGTGTTCGCCATG 397833 Query 1560 -CTTTTAGGGAACTGTATATAAAGGGCTAGTTGTAAGGAGGAGCACTAAAAGTACCGCCC 1618 | | ||| | |||||||||||| | || |||| | || | | || |||||| Sbjct 397832 GCCTCCAGGTGA---TATATAAAGGGCCCGCCGTGAGGAAGGACAATCGATGTTCCGCCC 397776 Query 1619 ACGGTAAAGTCATTACTCAG-----------AAAACA-TTTCAAATTTATGCCATCTGAT 1666 | || | | ||| ||||| |||||| ||||||| || |||| | | Sbjct 397775 ATGGCGAGATTATTGCTCAGCTTTTCTCCAGAAAACACTTTCAAAATTTTGCCGCCCAAG 397716 Query 1667 CTTGGATAAAAGCAAGGCTCGAAGGAAATG---AAGTTACCCTTAAGATGGGCAGATGCT 1723 || | |||||| |||| |||||||||| | |||||||| ||| ||||||||||| Sbjct 397715 GCTGAGTGAAAGCAGGGCTGGAAGGAAATGCTGAGGTTACCCTCAAGGTGGGCAGATGCC 397656 Query 1724 TGACGCACTGCATATACACACCGG 1747 |||| || |||| |||||| || Sbjct 397655 TGACTCAGTGCAGGCACACACAGG 397632 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/235 (71%), Gaps = 9/235 (4%) Strand=Plus/Minus Query 1071 CCACAGCTCTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCA 1130 ||||||| || ||||| |||||| ||| ||| || ||| | | | | | |||| Sbjct 398282 CCACAGCCCTGGCTTCAGGTCTGCAAA-GAGCCCCTTCTTCTGG-GCGCAAGGAAAGGTG 398225 Query 1131 TTTTAAAGAAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGTT 1190 ||||||||||| ||||||||||| |||||||| |||||||||| | | ||||| |||| Sbjct 398224 TTTTAAAGAAATGGCTTAGAAAAGAAATCTGGAGGGCACTTACGCAGTTTTCCAAAAGTC 398165 Query 1191 TTGAAAATGAGAACTGTAGTTCTGTGATTA-CAGCTGATTGT-ATGTCC-CGTGGTAGTG 1247 | | |||| || ||||||| |||| | || || | ||| | || | | Sbjct 398164 TCTCAGATGAAGCCTTTAGTTCTATGATGATTTTCTTCAGGTCACTTCCACCAGGGATGG 398105 Query 1248 GATGGCCGTG-GGA-GGAGAGCAAGGCTCCGGAACAGCAGAGCAGGAACAGGGCA 1300 || |||||| ||| ||| ||| ||| ||| |||||||||||| | ||||||| Sbjct 398104 GA--GCCGTGTGGACGGACAGCCAGGTTCCCATACAGCAGAGCAGAAGCAGGGCA 398052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438496112772000