Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq32 322 6e-83 seq138 161 1e-34 seq162 152 6e-32 seq589 98.7 1e-15 >seq32 Length=9580343 Score = 322 bits (356), Expect = 6e-83 Identities = 654/962 (68%), Gaps = 17/962 (2%) Strand=Plus/Minus Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118 |||||| ||| | | |||| ||| || | |||||||| || || | ||| ||| Sbjct 5093854 CCAGGGCTTTAAGCCTCAGATGCTCATCCAAACACTGGATGGCAAAGAGGTCAATGTCCA 5093795 Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178 || ||||| || || |||||||| ||| || || |||||| || | || || | Sbjct 5093794 TGTCAAACTTATTGGCAAACAGGTGGTGC---TTGCGCAGTATCCAGTTCAAGTCACCTG 5093738 Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238 ||| || || |||||||| ||||||||||| ||| |||| || ||||| | || || | Sbjct 5093737 CTCCAAAAACACACACGGAGCGCACGTGCACCCCGTTGCAGGGTGGATAGGGTGCGCCCT 5093678 Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298 || || || || || |||| ||||| || || ||||||| || || ||||| |||| Sbjct 5093677 TGTAAACGTCACCTTCAAAGTACTGCCATTTGACAAACCTAGCAATTGCTTGCATATCGG 5093618 Query 162299 AGGTGTCGTACTTGTACACTGACGG-CACGGCTCCAGGAACACCCGGCAGTCTCTGTAGA 162357 | |||||||||| | ||| | || || | ||||| || | || | ||||| | | Sbjct 5093617 ACATGTCGTACTTAT-GACTTAAGGACAGTGAGCCAGGGACTTCAGGGATCCTCTGAATA 5093559 Query 162358 GTAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTG 162417 || ||||| || | || || || ||||| || || |||| ||||||||| |||| | | Sbjct 5093558 GTGGCCCAGAGATACTCATCCGGGCTATATGTGTCTTTCGCCCACTCCATAAACTTCTGG 5093499 Query 162418 ACCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTA 162477 | ||| || | ||| | ||| ||||| |||| | || | || || || || Sbjct 5093498 ATTTTTTCATTCTCTAGCACGTACTCTACGTACTTCCTGCTGACCACGAAATAGGCACTG 5093439 Query 162478 CCAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACC 162537 || ||||||| || | | |||||| || ||||||| ||||| || | | Sbjct 5093438 CCCGAAAACAGAGGCGTTTCAAGAGGAGGTTGCACTTTGTCAGTCCCCGTATTTGTCAGC 5093379 Query 162538 ATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGT 162597 |||| || || ||| | | ||| ||||||| | | ||| ||| || || | Sbjct 5093378 TTTCCATCCACCACCTCATAGTGCTTTTTCCACCTTTCTTTTTTA-TGG--GATGGCATT 5093322 Query 162598 ---TCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGA 162654 || |||||||| |||| ||| | | | ||| |||| | || || || || Sbjct 5093321 CTCTCCGTCTCTAGGTTGTTTTCTCCCACTAGTGACTTGAGCTTCCTGACAATTTCCAGG 5093262 Query 162655 TTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTG 162714 ||||| |||| ||||| || |||||||||| || || | || ||||| || | Sbjct 5093261 TTGGTTTTAATAGGAAAATCCATGCCGCAGAGGTTGATCAGGTACTTCCAGCCTGCGTTT 5093202 Query 162715 AGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTAC 162774 | || || ||| | | |||||| || ||||||||||| ||||||||||| |||||| Sbjct 5093201 CTTTTGTGGAGGTCCCGCATACAGTTGAGGTCGGCCTGGACCCGACTCCACGATGCGTAC 5093142 Query 162775 ACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCC---C 162831 || || |||||| | | |||| |||||||| || |||||| || | || || | Sbjct 5093141 ACCACAGTCTCCAGCTGACTGGCCACAAAGACGTTACTGAAACAGGATGCAATGCCAGTC 5093082 Query 162832 ATCACGGCCAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTC 162891 | | ||||||| || | ||| |||| |||| | || ||||| | ||| || | |||| Sbjct 5093081 ACCGCGGCCAGGAAGGA-ATC--CTCCGATTTCTTGTCCACGTGAATGCAATAGAAATTC 5093025 Query 162892 TGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACG 162951 ||||| ||||||||||||||| | || || ||||| || || || || || || || Sbjct 5093024 TGAGGCATGTAGATGGCCCTCAGGAGCCTGTCAAACATTTCAATTTTGTGATGAACGACT 5092965 Query 162952 ATAGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGACCCTGTAAAGTACTTG 163011 || ||||| ||||| || ||||| ||||| || | || |||| || || ||| ||| Sbjct 5092964 ATGGAATATGCTATTGGAAACTCTGCCTCTTCCCTGCTAAGAGGTTCTACAATGTATTTG 5092905 Query 163012 CG 163013 || Sbjct 5092904 CG 5092903 >seq138 Length=3617779 Score = 161 bits (178), Expect = 1e-34 Identities = 231/323 (72%), Gaps = 2/323 (1%) Strand=Plus/Minus Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830 || |||| || || |||| | || || || || ||||| || || ||||| || | || Sbjct 2232569 CAAAGAGGGTGAGGCAGGCTATTCCTGACATCTTCCCGGAACCGAAGGTATTGAAGAGAC 2232510 Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890 || | |||| ||||| || |||| ||||| ||||| || || | || | || |||| Sbjct 2232509 ACTTGTAACACCCTTCATCGTCCAGAGTGGTATTCCAGAAGGTGATGGTTGTGTT-CTGA 2232451 Query 171891 -GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGA 171949 |||| || | || ||||||| | ||||| || | || ||||| || || || || Sbjct 2232450 AGTCCCAGCTCAGTTATGTTCATCTTATCCTTATAGGCGGGTTGGACCACGACCCCATGC 2232391 Query 171950 TTCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACT 172009 | || |||||| ||| |||||||||| ||||| | |||||| || |||||||| || || Sbjct 2232390 TCCTTGCTGAAAGTGACCATGTTTTCTGGGCTTGAAGCCTTCATTTTCTGCCATGTCACA 2232331 Query 172010 ATTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAAT 172069 || | ||||| | | |||| || |||||| |||||||||||||||||||| Sbjct 2232330 ATAACGACTTCCTGGGGAGTTTCCAGGAAGCATCGTAAAGAAGCAGGTGTGTTCAGCGGC 2232271 Query 172070 TCCCTTTCGTCTTGCGTTACCAC 172092 | |||| ||||| || ||||| Sbjct 2232270 TGTTTTTCATCTTGGGTCACCAC 2232248 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/248 (69%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562 |||| ||| |||| |||| |||||||||| ||| | || | ||| |||||||||| Sbjct 2235042 ACAGGTTGACTGAAGTCTTGCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCT-- 2234985 Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622 | ||||| || | || || ||||| | || || | ||| | ||||| || ||||| Sbjct 2234984 -TCCCCACCTGGTTCTTGGGGTCTTTGATGTGGAGGACGCTGATGACAGACGTGGTCCCA 2234926 Query 171623 TTACGATGTAGAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAAAAT 171682 || ||| | | | |||||| || || ||||| || || || || ||||| | Sbjct 2234925 TTGGAGTGTGTGATAATCTCAGTACTGTTGTCCATTCCTGACCCAGCGACCTTCCAGGAG 2234866 Query 171683 ATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTAATCCATCTTCGAAGAAC 171742 || |||| ||||| | ||| | ||||||||||| | |||| |||||| | || Sbjct 2234865 ATTGCAGGGGCTGGGCGGGCATTGGCAGAGCAAGTGACATTTAGGTGGTCTTCGGATAAT 2234806 Query 171743 TCATAGTG 171750 | |||||| Sbjct 2234805 TTATAGTG 2234798 >seq162 Length=3060309 Score = 152 bits (168), Expect = 6e-32 Identities = 349/514 (68%), Gaps = 15/514 (3%) Strand=Plus/Minus Query 176967 TAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAATTTTCGTAATTCTCTCTCGAT 177026 || || | ||| |||||||| | |||| | || | |||||||| || || || || ||| Sbjct 345182 TAATCTTCCACATGAATGAATGAGTCTGCTGGAATATAATTTTCATAGTTTTCCCTAGAT 345123 Query 177027 GTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATCGGTAGAGTTTTTCGGTAATA 177086 | || || || || ||||| | || |||| ||||| |||||| ||||| || || Sbjct 345122 GGCCCCAGGACAATAGGTACGGAGCCAGCCAGAAGAGCATTGTAGAGCTTTTCTGTGATG 345063 Query 177087 TAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATTTACAGGAAGATA--GTAGCG 177144 || || |||| | ||||| || || | || || |||||||| | ||||| |||| Sbjct 345062 TAATCTTTGTGGATTGAGTTTTCGAAGGAAAGGTAAAATTTACAAGTAGATATGGTAG-- 345005 Query 177145 GGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTTCCCGTATACATGTATATCTA 177204 | || || | | || | ||| ||||| | | | | ||| || ||| || || | Sbjct 345004 GAATCAAATTTTTATTATTCACATACTCTCCAAATGCTTGCCCATAGGTATGGATTTCAA 344945 Query 177205 TGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCA-CGTGGTCGTTGTTCCAATTGCTG 177263 || ||| || ||||| ||| || || || | |||| || |||||| || || Sbjct 344944 TGCTTTTGCTTAGCTCGTTGTAATA-CTTGACCCGGGCGTGCTCAGGGTTCCAGTTACTT 344886 Query 177264 ACGACCCAGCAAACTAACTTGCTCTTTGCG-GGAACGGGATTCGAT-ACTAATGCAGTGT 177321 || |||||||| || ||||| |||||||| || || ||| | || || | || | Sbjct 344885 ACAACCCAGCACACCAACTT-CTCTTTGCTTGGCAC----TTCAAACACGAAGGG-GTTT 344832 Query 177322 CT-CTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCGAGTCGCGTCTGTACGTTAAC 177380 | || | ||| | | ||||| ||||| || ||||| |||||||| | || || | Sbjct 344831 GTGCTCACCGTCAATACGCCATAAGGCACTTGGATATCGGAGTCGCGGCGATAAGTCAGA 344772 Query 177381 GTGAGATTGAAAAGGTTTTCTATACCTTGTTTGAAGGGGCTGTTACTGGGCGATTCTAAG 177440 ||||||||||| |||| || || || | || ||| ||| | | || ||||| || Sbjct 344771 GTGAGATTGAATAGGTGCTCAATGCCATTCTTCTGGGGCGTGTGAGTCGGTGATTCCAAA 344712 Query 177441 TTCATCCATATCCACTTTTGAAAGGTTGGTCTGG 177474 |||||||| ||||| || || |||| ||| |||| Sbjct 344711 TTCATCCAAATCCATTTCTGGAAGGGTGGCCTGG 344678 >seq589 Length=466317 Score = 98.7 bits (108), Expect = 1e-15 Identities = 232/345 (67%), Gaps = 8/345 (2%) Strand=Plus/Plus Query 162643 ACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTC 162702 |||||||| ||||||||| | ||||||||| || ||||| ||| | | |||||| Sbjct 188021 ACCATCTCGGCATTGGTCTTTATGGGAAAGTCTGTCCCGCATGTATTCAGCAAGTATTTC 188080 Query 162703 CACTTAACGCTGAG-TCCGTA-CAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGAC 162760 || || |||| || | | || || | | ||||||||| || ||||| || | Sbjct 188081 CAGGGCAC--TGAGCTCTGGAGCAAGTCTTCCATACAGTTCAGGTCCGCCTGCACCCTGG 188138 Query 162761 TCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACG 162820 ||| || || || || || | ||||| || |||| | ||||||||| ||| || | Sbjct 188139 ACCAGGAGGCATAAACCACCCGAACCAACTTACTGGCTATAAAGACATTTGGGAAGCATG 188198 Query 162821 AAACTATCCCCATCACGGCCAGTGAGAACAT--CGGGTCCGCTTTCCTATCTACGTGTAC 162878 ||| || || | || ||| | ||| | | || | ||| ||| ||||| || Sbjct 188199 AAATAATTGCCCTGACTGCCTCTTTGAAAGTGTCTGGG--GACTTCTGATCCACGTGGAC 188256 Query 162879 GCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTT 162938 || |||| ||||||||||| || | || ||||| | || || || | || ||||| Sbjct 188257 ACAATATATGTTCTGAGGGGCATACACAGCTCTCAGCAGCCTTTCAAAGTTTTCAATCTT 188316 Query 162939 ATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983 | || ||||| ||||| || || || ||||| || |||||| Sbjct 188317 CTCATGGACCACCATAGAGTATGCAATAGGGAAGTCTAACTCCTC 188361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578347736918400