Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq138 237 2e-57 seq402 163 3e-35 seq146 141 1e-28 seq196 134 2e-26 seq40 82.4 9e-11 >seq138 Length=3617779 Score = 237 bits (262), Expect = 2e-57 Identities = 244/319 (76%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 ||||||||||| ||||| | || ||||||||| || || || | ||||| |||| Sbjct 2232248 GTGGTGACCCAAGATGAAAAACAGCCGCTGAACACACCTGCTTCTTTACGATGCTTCCTG 2232307 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 | ||| | ||||| || | ||||| || ||||||||||| ||| | | | ||||| Sbjct 2232308 GAAACTCCCCAGGAAGTCGTTATTGTGACATGGCAGAAAATGAAGGCTTCAAGCCCAGAA 2232367 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||| | ||||| ||||| || || ||||| |||||||| || || |||||||| ||| Sbjct 2232368 AACATGGTCACTTTCAGCAAGGAGCATGGGGTCGTGGTCCAACCCGCCTATAAGGATAAG 2232427 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 || ||||| || |||| ||||| || ||| |||||||||| || ||||||||||| | Sbjct 2232428 ATGAACATAACTGAGCTGGGACTTCAGAACACAACCATCACCTTCTGGAATACCACTCTG 2232487 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 || || || ||||| ||||| || ||||| || ||||| || || ||||| || || || Sbjct 2232488 GACGATGAAGGGTGTTACAAGTGTCTCTTCAATACCTTCGGTTCCGGGAAGATGTCAGGA 2232547 Query 171372 GTGGCCTGCCTCACCCTCT 171390 | |||||||||||||||| Sbjct 2232548 ATAGCCTGCCTCACCCTCT 2232566 Score = 176 bits (194), Expect = 5e-39 Identities = 205/277 (74%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 |||||||||| || || || || |||||||| | || |||||||| || |||| || Sbjct 2234777 GTGCAGCCCAAAGTATTCCTTCACTATAAATTATCCGAAGACCACCTAAATGTCACTTGC 2234836 Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512 ||||||||||||||||| | ||| || | |||||| | | ||||||| ||| || Sbjct 2234837 TCTGCCAATGCCCGCCCAGCCCCTGCAATCTCCTGGAAGGTCGCTGGGTCAGGAATGGAC 2234896 Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572 ||||||| ||| || | | || || ||||| || || ||||| | ||| || ||||| Sbjct 2234897 AACAGTACTGAGATTATCACACACTCCAATGGGACCACGTCTGTCATCAGCGTCCTCCAC 2234956 Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632 | ||||||||||||| ||| |||| |||||||| |||||||| ||| ||||||||| Sbjct 2234957 ATCAAAGACCCCAAGAACCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGG 2235016 Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 | ||| |||| || || |||| | ||| |||| Sbjct 2235017 ACTGTGCAAGACTTCAGTCAACCTGTGAACAAAGGTA 2235053 >seq402 Length=911058 Score = 163 bits (180), Expect = 3e-35 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| |||||||| | ||| || | ||||||||||||||| | ||||||||| |||||||| Sbjct 128713 CTTCAGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 128654 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || || || |||||||| | |||||||||||||||||||| || ||||| |||| Sbjct 128653 GGGCACACCTAGCCCCATGTCGGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 128594 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| ||| ||||| || ||||| ||||| Sbjct 128593 CACCACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCAT 128549 Score = 82.4 bits (90), Expect = 9e-11 Identities = 115/160 (72%), Gaps = 6/160 (4%) Strand=Plus/Minus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 |||||||| ||||||||||| ||||| || || || || | || || |||||| Sbjct 126285 GCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATCTCCTTCTTTTCTGCTG 126226 Query 147343 GAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACT 147399 ||||| ||| | ||| || || || ||||||| | |||||||||||| | |||| Sbjct 126225 GAGAATCCCA---GGTTGTCCAGGAAGTCACGGGACCCATTGGCGTCCCAGATTCTCACT 126169 Query 147400 CCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGA 147439 ||||||| || || || |||| | ||||| ||| ||| Sbjct 126168 CCCTTGGACGACAGTTCTTTAGCATTTGTGGATCCCTGGA 126129 >seq146 Length=3351112 Score = 141 bits (156), Expect = 1e-28 Identities = 130/167 (78%), Gaps = 12/167 (7%) Strand=Plus/Minus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||||||| |||| ||||||| Sbjct 1997238 AGGGTTACCTGGGTTGCCAAGCCTTGTCCGAGATGATCCAGTTTTACCTGGAAGAGGTGA 1997179 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| |||||||||| || ||||||||||| ||||||| || | || Sbjct 1997178 TGCCCCAGGCCGAGAGCCA------------GGGCCCGGACATCAAGGAGCCCGTGAGCT 1997131 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | |||||||| ||||| ||||| || || || ||||||||| ||| Sbjct 1997130 CGCTGGGGGAGAAGCTGAAGACGCTGAGGCTGCAGCTGCGGCGCTGT 1997084 >seq196 Length=2513712 Score = 134 bits (148), Expect = 2e-26 Identities = 209/294 (71%), Gaps = 6/294 (2%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| || || ||| | |||| || |||||||| ||||||| |||| |||||||| Sbjct 1918490 GTACTCCCTAGTATTTGTCGTTGGCCTTATTGGCAACATCCTGGTGGTCCTGGTCCTCAT 1918549 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||||||||||||||| || |||||||| ||||| ||| ||||||||||| | ||| Sbjct 1918550 GCAGTACAAGAGGCTCAAGAGCATGACCAGCATCTACCTCCTCAACCTGGCCTTGTCTGA 1918609 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789 |||||| | | ||||| || ||||| ||| || || | || || | ||| | | | Sbjct 1918610 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGGTTGAC-TACAATCTGAAGGA--TAGCTG 1918666 Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849 | || | ||| |||| |||||||| | | | |||| | || | | ||||| Sbjct 1918667 GAGGTTCAGCGA-AGGCACA--TGTAAGTTGCTGTCGAGGCTTTACTACATAGGCCTGTA 1918723 Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGT 8903 ||| || || | || || |||||| |||| | |||||||| || || |||| Sbjct 1918724 CAGTGAGATCTTTTTCATGATCCTGCTGACCATCGACAGGTACCTGGCCATTGT 1918777 Score = 102 bits (112), Expect = 1e-16 Identities = 524/821 (64%), Gaps = 35/821 (4%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||| | |||||||| | ||||||| | ||||| | ||||| | | |||||| | Sbjct 1899250 TACGCCCTGGTGTTCGGGGTTGGGCTGCTGGGCAACGTGATGGTGGTGGTGATCCTCACA 1899191 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 ||||||| | | ||| | || |||||||||||| |||| ||||||||||| | ||||| Sbjct 1899190 AAGTACAGGCGCCTCTGCATTCTGACCAACATCTACCTGCTCAACCTGGCCATCTGTGAC 1899131 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGGG 8790 |||| | | ||||| || ||||| ||||| |||| || | |||| | | Sbjct 1899130 TTGCTCTTCCTCTTCACGCTGCCCTTCTGGATCCACT--ATCTGAAGTGGAA----GGAG 1899077 Query 8791 TGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCT---TTGCAACGTGGCACTG 8847 |||| | |||| ||||| ||||| | ||| || ||||| | ||| || Sbjct 1899076 TGGGTTTTTGGCCACTGTATGTGCAAGTTGCTCTCGGGGCTTTATTGCATC--GGC-TTG 1899020 Query 8848 TACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTAC 8907 ||| | || || | || ||||||||| |||| | ||| ||||||| || | || | Sbjct 1899019 TACGGGGAGATCTTTTTCATCATCCTGCTGACCTTAGACCGGTATCTGGCCATCGTCCAT 1898960 Query 8908 GCGGTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGCC 8967 || ||| | | || | ||| || | || |||||| | ||| || | | Sbjct 1898959 GCCGTGTTTGCCCTGCGGACCCGGACCGTCACTATTGGCATCATAAGCAGTGTCATCACG 1898900 Query 8968 TGGATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCCAATAATGCC 9027 ||| ||||| | | ||| || | || || |||||||| ||| | || | | Sbjct 1898899 TGGGCCCTGGCGGGGCTGGTGGCCCTCCCTGAATTTATCTTCTATAAGGCCCAGGAGCAG 1898840 Query 9028 ACAGGCAAGGGGGTCTG-----CCAAG--CCTC-----CTACACAGACTTTTGGAAGGGG 9075 | || | | | |||| || | || | | | ||| |||||| Sbjct 1898839 TCCGGAATGCTGTTCTGTAGTTCCCTGTACCCCGAGGACGAGGAGGACGCCTGGAAGCAT 1898780 Query 9076 GTTGATGTTACCAGCATGACCATGGTCACCCTCATCCTGCCTTTGCTTATCATGGCCTTC 9135 || ||| || |||| | | | | ||| ||||| |||| || |||| || Sbjct 1898779 TTTTATGCCTTGAGGATGAACCTCTTGAGCCTGGCTCTGCCCCTGCTCATTATGGTGGTC 1898720 Query 9136 TGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAACCTGCA 9194 ||||||| |||||||||| || | | | |||| || ||| || ||| | | Sbjct 1898719 TGCTACTCCGGAATCATCAAGACGCTGATGAGATGCCC-CAGCAG---GAAAAAGCACAA 1898664 Query 9195 CGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCTACAA 9254 ||| || ||||||||| ||||| ||||| | | ||| | || ||| ||||||||| Sbjct 1898663 GGCCATCCGGCTCATTTTCATCATCATGGTGGTCTTTTTCATTTTCTGGGCCCCCTACAA 1898604 Query 9255 CGTCCTGCTCATTTTACACACCTACCAAGAGGCCATTTTTG-GGCCAGACTG--TGAAGC 9311 | | || || || | | | | ||| || | | |||| ||| ||| || || Sbjct 1898603 CCTGGTGGTCCTTCTCTCCGCTTTTCAAAAGATCTTCTTTGACATCAG-CTGCATGCAGA 1898545 Query 9312 GCGGCGCAGGGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTG 9371 || || | ||||| ||||| | |||| | ||| ||||| ||| ||| |||||||| Sbjct 1898544 GC-AAACA-GCTGGACGTGGCCTTGCAGGTGACGGAGGTGATCTCCTACACGCACTGCTG 1898487 Query 9372 CGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 |||||||||| |||||||||| || || || || | ||||| Sbjct 1898486 CGTCAACCCCATCATCTACGCCTTCGTCGGGGAGAGGTTCC 1898446 Score = 102 bits (112), Expect = 1e-16 Identities = 158/223 (71%), Gaps = 12/223 (5%) Strand=Plus/Plus Query 9196 GCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCTACAAC 9255 |||||| |||||||| |||| || | || | ||| ||||||||| |||||||||| Sbjct 1919079 GCCGTCCGCCTCATTTTTGTCATCATGATCCTCTTCTTTCTCTTTTGGACCCCCTACAAC 1919138 Query 9256 GTCC---TGCTCATTTTACACACCTACCAAGAGGCCATTTTTGGGCCAGACTGTGAAGCG 9312 | |||| |||| | | ||||| | | |||||| || ||||| | Sbjct 1919139 CTGACTATGCTTATTTCTG---CTTTTCAAGACGTCTTTTTTGTTGATGAGTGTGA---G 1919192 Query 9313 CGGCGCAG---GGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGC 9369 | | ||| | ||||| ||||| || |||| | ||| ||||||||| ||| |||||| Sbjct 1919193 CAGAGCAAACAGCTGGACCTGGCCATCCAGGTGACGGAGGTGATCGCCTACACGCACTGC 1919252 Query 9370 TGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 ||| |||||||| ||||||| | ||||||||||| | ||||| Sbjct 1919253 TGCATCAACCCCATCATCTATGTCTTTGTGGGCGAGAGGTTCC 1919295 Score = 82.4 bits (90), Expect = 9e-11 Identities = 127/180 (71%), Gaps = 5/180 (3%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| |||||||| | || ||| | | ||||| ||||| |||| |||| || Sbjct 1848209 TACTCGCTGGTGTTCATCTTCGGGTTTGTGGGCAACCTGCTGGTCGTCCTCATCCTGATC 1848150 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 || | ||| | ||| | || |||||| |||||| |||| ||||||||||||| ||| Sbjct 1848149 AACTGCAAAAAGCTGAAGAGCATGACTGACATCTACCTGCTCAACCTGGCCCTCTCCGAC 1848090 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGGG 8790 ||||| | || | || |||| | |||||||| ||| || | ||||||||||| Sbjct 1848089 CTGCTCTTCCTTCTGACGTTCCCAGTGTGGATTCA-TTCTGCT----GCGAACTGGTGGG 1848035 >seq40 Length=8424078 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 8618 TGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATAAAGTACA 8677 |||| ||| |||||||||| | || || || ||||| | || ||||| | ||||||| Sbjct 634174 TGGTCTTTCTGTTTGGGCTGCTGGGAAACTCCATGGTGGTTCTGGTCCTGTTCAAGTACA 634115 Query 8678 AGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGACCTGCTGC 8737 || |||||||| |||||| | | | |||| ||||||||||| | |||||||| Sbjct 634114 AGCGGCTCAGGTCCATGACGGATGTGTACCTGCTCAACCTGGCCATCTCGGACCTGCTCT 634055 Query 8738 TGATTTTCACCCTCCCCTTTTGG 8760 | | || ||||||| || ||| Sbjct 634054 TCGTGCTCTCCCTCCCTTTCTGG 634032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583403000385600