Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14]
11,654 sequences; 2,034,575,300 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq10 174 2e-38
seq139 127 3e-24
seq115 98.7 1e-15
seq93 87.8 2e-12
>seq10
Length=16450340
Score = 174 bits (192), Expect = 2e-38
Identities = 488/744 (66%), Gaps = 25/744 (3%)
Strand=Plus/Minus
Query 39309 GTGACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGC 39368
||| ||| ||| |||| | || ||||| || || | ||||| || || || || || |
Sbjct 11919843 GTGGCATCACTTCCATCCTCTGATATTCGCCCACTCTCTTCTCAAAGAAGTTCGTCTTCC 11919784
Query 39369 CTTCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTAT--Attttttttt 39426
||| ||| ||||| |||||||| ||||| ||| | || ||| | || |
Sbjct 11919783 TTTCTCGTGAAATATTCTCCATGAAGTCAAATGGACT--TTCTATTCGGAAAACCTTGCT 11919726
Query 39427 AAATCCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTC 39486
||| || | || | | |||||| | || ||||| ||||| |||||||
Sbjct 11919725 AAAACCCAGCTCCAGCCTGAGTCTATCAGTCACGAATTCAATGTACCCCTTCATCAGAGT 11919666
Query 39487 ACAATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTC 39546
|||||||| | |||| || ||||| | ||||| || || ||||| | || || |
Sbjct 11919665 GCAATTCATCGCAATGACATTCACTGGCAAGGCCTCTGTGAGGAACTCCTGCTCTATCCC 11919606
Query 39547 TACGGCCTCTGTTATTATCGATGTTACTACCTCATCACTC--GGTGGATGCAATAAATGT 39604
|| || | || || ||| | | || |||| | || ||| |||| | |||
Sbjct 11919605 AACAGCGTTGGTGATGATCTCTTTCAC--CCTCTGCTCTGCAGGTTTGTGCAGCAGGTGT 11919548
Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664
|| ||||| | |||||| ||||| || || | ||||||||||| ||| | | || |||
Sbjct 11919547 TTGAACATCAGGCAGGCAAAGTCTCAGTGCAAACCCTCATCTCTGCTACTCATTTGGTTG 11919488
Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724
|| |||| || ||||||| || | | || |||||||| ||||| | ||||||||
Sbjct 11919487 GAGAATG--AGGCCAGGCACCAGGTCTCATTTCTTGAGCCAGAATATCGGCGCAAAAGA- 11919431
Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTA 39784
|||| ||||| |||| ||||| || |||| | ||||| || ||
Sbjct 11919430 ----------AGATTCCTTCCACTGTGGCAAACGCTACAACACGTTCTCCATAGGCGGTC 11919381
Query 39785 TCATTATGT---ATCCACTTCTGTGCCCAATCAG-CTTTCTTCTTTACACAAGGCATTGT 39840
|| || | ||||| | ||||| ||| || |||||| |||||||||| ||
Sbjct 11919380 TCTTTGTTCCTGATCCAACGCAAGGCCCAGCCAGGCTGCCTTCTTGGCACAAGGCATCGT 11919321
Query 39841 TTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAA 39900
|| | || || ||||| | | |||| | |||||||| | || || || |
Sbjct 11919320 CTCCACGGCGTTGAAGAGCAACTCCCTTTCCTTGGCATCTTTAATGTCAGTGTCAATGAG 11919261
Query 39901 CAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCT 39960
||||| |||||||| |||||||||||||| || || || || || | ||| ||||| |
Sbjct 11919260 GAGACTGTACATTTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCTGTAGAAACAGCG 11919201
Query 39961 TGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCC 40020
||||| || || || || ||| | ||| | ||| |||| || ||||| || ||
Sbjct 11919200 GGCTTCGGTGATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTCTCATTGGTGATGCC 11919141
Query 40021 ATCACTAGCGGCAAAAAATGCCAA 40044
|| || || | || || |||||
Sbjct 11919140 ATGGCTGGCAACTAAGAAGGCCAA 11919117
>seq139
Length=3560323
Score = 127 bits (140), Expect = 3e-24
Identities = 108/133 (81%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
|||||||| || || || |||||||||||||| || || |||||||| ||||| | ||
Sbjct 1651053 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 1650994
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838
||||||||||||||||| |||||||| || ||||| ||||| || || | | ||||||
Sbjct 1650993 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 1650934
Query 68839 TTTCTAAGACCAT 68851
||||| | |||||
Sbjct 1650933 TTTCTTATACCAT 1650921
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390
|| |||| |||| ||| |||||||| ||||| || || || | || || || ||||| |
Sbjct 1618138 CACCACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCA 1618079
Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450
|||| ||||||||||| || | ||||| | || || ||| |||| ||||| || ||||
Sbjct 1618078 GAATGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTAT 1618019
Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
||| ||| | ||| || || || | |||| ||||| || ||||||||||
Sbjct 1618018 CTAGTTCCACAGTAGTGACCCCACTGTATAAACCTTGGATTACTTTCATGG 1617968
Score = 93.3 bits (102), Expect = 6e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
||||||||||| || ||||| ||||||||||| || | || || || |||| | | |
Sbjct 1634482 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 1634423
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
||||| |||||||| || || || | ||| |||||||| | || || ||||||| ||
Sbjct 1634422 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 1634363
Query 69715 TCTAGATATATCGCCATGACTCCCGGTCG 69743
|| || || || || | |||| |||||
Sbjct 1634362 TCCAGGTAAATAGCAAATGCTCCAGGTCG 1634334
>seq115
Length=3908719
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700
|||||||| || || | ||| || ||||| |||||||||||||| ||||| | || ||
Sbjct 3778542 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCTTT 3778483
Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760
| ||| ||||| ||||| || || || || ||||| || |||||||| || ||||| ||
Sbjct 3778482 AACCAGAATATAGCAGCGAATGAGCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 3778423
Query 39761 AC 39762
||
Sbjct 3778422 AC 3778421
>seq93
Length=4592439
Score = 87.8 bits (96), Expect = 2e-12
Identities = 176/257 (68%), Gaps = 8/257 (3%)
Strand=Plus/Plus
Query 37347 TCCTGTTGATCCAAA--CCCTTGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCA 37404
||| || || ||||| ||| ||||| ||| | ||| |||| | | ||| |||||
Sbjct 2488804 TCCAGTAGAACCAAAACCCCCTGAGCCCCTTTCAGTGT--CATCCAAAACTTGAACTTCC 2488861
Query 37405 TTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTT 37464
| | || |||||| | || |||| | | || ||||| || |||| || || | |||
Sbjct 2488862 TCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCATT-TTT 2488920
Query 37465 ATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCT 37524
| || |||||| ||| ||| ||| | | | || |||| ||| || |||||||||
Sbjct 2488921 ACTTCAAAATTTTCTTTGCCAAAATTAAATAATACAACACCAAGATTTCCTCTATAATCT 2488980
Query 37525 TCATCGATTACTCCGCCTCCTACATCAATA---CCTTTTAGAGACAAACCCGATCTAGGA 37581
||||| || || || |||||||||| ||| |||| || ||| | || | |||
Sbjct 2488981 TCATCTATAACACCAGCTCCTACATCTATAAAGTGTTTTGCAGCCAAGCTGGAACGTGGA 2489040
Query 37582 GCTATTCTTCCATAACA 37598
||| ||||||||| ||
Sbjct 2489041 GCTCCTCTTCCATAGCA 2489057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686808734560560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |