Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq69 93.3 4e-14 seq247 84.2 2e-11 seq139 82.4 6e-11 seq132 82.4 6e-11 seq62 82.4 6e-11 >seq69 Length=5728823 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| || | || || ||||| |||||||||||||| | |||| | Sbjct 4210531 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGACCA 4210472 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || |||||||| || || |||| |||||||| || || || || | ||||| || Sbjct 4210471 TCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 4210412 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||| || ||| | | || | ||||| ||| ||||| | || || || Sbjct 4210411 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCGCAAGGGTGATG 4210352 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | ||||| ||||| || ||||||||||| ||||| |||| Sbjct 4210351 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCTCTGC 4210311 >seq247 Length=1816170 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| ||||| || | || || ||||| |||||||||||||| || ||| | Sbjct 1422559 CGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGACAGAGCGCGACCA 1422618 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || |||||||| || || |||| |||||||| || || || || ||||| || Sbjct 1422619 TCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGGTGCCCTCCTTG 1422678 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||| || ||| | | || | ||||| ||| || || || || || || Sbjct 1422679 TC-TCGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATG 1422737 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 | ||||| ||||| | ||||||||||| ||||| |||| Sbjct 1422738 GTCTTGCCAGTCAGGCTCTTCACAAAGATCTGCATCTCTGC 1422778 >seq139 Length=3560323 Score = 82.4 bits (90), Expect = 6e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 131030 GCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTT 131089 ||||| || ||| |||||||| ||||| |||||||||||||| ||||| ||||| Sbjct 1639095 GCCAGATCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 1639036 Query 131090 AATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGA 131149 ||| | || | ||||| ||||| | |||| | ||||||||| ||||| ||| Sbjct 1639035 AATAACTGGGCCTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAGA 1638976 Query 131150 CCCTGTATCCCAA 131162 || |||| ||||| Sbjct 1638975 CCTTGTACCCCAA 1638963 >seq132 Length=3652367 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| |||||||| ||||| | |||| | || || Sbjct 468654 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTTTAGTCTGAGAGAGTGCGGCCATCCTCT 468595 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || || |||| ||| |||| || || || || | ||||| || || | Sbjct 468594 AGCTGTTTGCCCGCAAAAATCAGATGCTGATGGTCAGGTGGGATGCCCTCCTTGTCTTGG 468535 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || ||| | | || | ||||| ||| |||| || || || || || ||| Sbjct 468534 ATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAATCTCAAGGGTGATGGACTTG 468475 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 || |||| || ||||||||||| ||||| |||| Sbjct 468474 CCAGTCAAGGTCTTCACAAAGATCTGCATCTCTGC 468440 >seq62 Length=6495742 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| |||||||||||||| | |||| | || || Sbjct 4413312 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGGCCATCCTCC 4413253 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| ||||| |||| || ||||| || || ||||| | ||||| || | Sbjct 4413252 AGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTGG 4413193 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || ||| | | || ||||| ||| ||| || || || || || | ||| Sbjct 4413192 ATTTTAGCTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTTG 4413133 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 || ||||| || ||||| ||||| ||||| |||| Sbjct 4413132 CCAGTCAGGGTCTTCACGAAGATCTGCATCTCTGC 4413098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424874045239248