Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq139 100 3e-16 seq410 86.0 7e-12 >seq139 Length=3560323 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | || ||| | ||||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 1635668 TGGTATGCGATTATTGAGTCTCAGACAGAGACAGGTACCCCATACATGCTCTACAAAGAT 1635727 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 ||||||||| ||||| ||||| |||| |||| ||||| | ||| || || Sbjct 1635728 TCCTGTAACCGGAAGAGCAATCAGCAGAACCTGGGAACAATCAAATGCAGCAACCTGTGC 1635787 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 |||||||| | |||| ||| |||||||||| Sbjct 1635788 ACAGAAATAGTAGAATATACCAGCAAAGATGAG 1635820 >seq410 Length=980372 Score = 86.0 bits (94), Expect = 7e-12 Identities = 78/96 (81%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 94828 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 94886 || ||||| ||||||||||| || || ||| ||| | || | ||||||||||||||||| Sbjct 303663 GTGGAGGGAATCTTCTTCTCCGGCTCTTTC-GCGTCGATCTTCTGGCTCAAGAAGCGAGG 303721 Query 94887 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922 || ||||| || ||| |||||||||||| ||||| Sbjct 303722 CCTGATGCCTGGCCTCACCTTCTCCAACGAACTTAT 303757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583175833482960