Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq93 87.8 2e-12 >seq93 Length=4592439 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/200 (70%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 ||||| ||||||||||| || |||| | || || ||||| | || || || Sbjct 2488856 ACTTCCTCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCA 2488915 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || ||||| | ||| || || | |||||||||||| | | ||| | |||||| || Sbjct 2488916 TT-TTTACTTCAAAATTTTCTTTGCCAAAATTAAATAATACAACACCAAGATTTCCTCTA 2488974 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| ||||| || |||||||| ||||| || || ||||| | || Sbjct 2488975 TAATCTTCATCTATAACACCAGCTCCTACATCTATAAAGTGTTTTGCAGCCAAGCTGGAA 2489034 Query 22815 CTAGGAGATATTCTTCCATA 22834 | |||| | ||||||||| Sbjct 2489035 CGTGGAGCTCCTCTTCCATA 2489054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603092931636960