Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq32 154 2e-32 >seq32 Length=9580343 Score = 154 bits (170), Expect = 2e-32 Identities = 285/411 (69%), Gaps = 8/411 (2%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || || ||| |||||||| |||||||| || || || || || || | || ||||| Sbjct 5092921 CCTCTTAGCAGGGAAGAGGCAGAGTTTCCAATAGCATATTCCATAGTCGTTCATCACAAA 5092980 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 || || ||||| || | |||||||||||||||||| || ||||| |||| ||| | Sbjct 5092981 ATTGAAATGTTTGACAGGCTCCTGAGGGCCATCTACATGCCTCAGAATTTCTATTGCATT 5093040 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCAT--CCGGGGCGTCTCGGCCATCGCCAGGT 13848 ||||||||| || || | || ||| | ||| || | || | ||| || | Sbjct 5093041 CACGTGGACAAGAAATCGGAGGATTCCTTCCTGGCCGCGGTGACTGG--CATTGCATCCT 5093098 Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGAC-GTGGTGTACGGCTCCTGGAGT 13907 | ||| |||||| ||||| | |||| | ||| |||||||||| || |||||| Sbjct 5093099 GTTTCAGTAACGTCTTTGTGGCCAGTCAGCTGGA-GACTGTGGTGTACGCATCGTGGAGT 5093157 Query 13908 CGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAG-TGGAG 13966 || || ||||||||||||| ||| ||| |||||| || || || | |||| Sbjct 5093158 CGGGTCCAGGCCGACCTCAACTGTATGCGGGACCTCCACAAAAGAAACG-CAGGCTGGAA 5093216 Query 13967 GTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCG 14026 ||||||| ||||||| ||||| ||||| || || | || ||||||||||| || || | Sbjct 5093217 GTACCTGATCAACCTCTGCGGCATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAG 5093276 Query 14027 GGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCC 14077 | ||| ||| | || | || | ||| ||| |||| ||| | ||||| Sbjct 5093277 GAAGCTCAAGTCACTAGTGGGAGAAAACAACCTAGAGACGGAGAGAATGCC 5093327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658643238167040