Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq69 109 3e-19 seq247 100 2e-16 seq132 91.5 9e-14 >seq69 Length=5728823 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| |||||| || || ||| ||| || ||||| || || ||||| Sbjct 4210544 GCCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGA 4210485 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || ||||| || ||||| || | |||||| ||||| || || Sbjct 4210484 GAGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 4210425 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||||||| ||| ||| | ||| || | ||| ||||| | ||| | Sbjct 4210424 GATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAA 4210366 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | | | ||| || || || || || | || |||||||| |||||||| Sbjct 4210365 CCGCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4210317 >seq247 Length=1816170 Score = 100 bits (110), Expect = 2e-16 Identities = 162/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||||| |||||| || || ||| ||| || ||||| || || ||||| Sbjct 1422546 GCCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGA 1422605 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || | || | || || || ||||| || ||||| || | |||||| ||||| || || Sbjct 1422606 CAGAGCGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 1422665 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 |||||||||||| ||| ||| | ||| || | ||| ||||| | ||||| Sbjct 1422666 GGTGCCCTCCTTGTCT-CGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCCA 1422723 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || | | |||||||| |||||||| Sbjct 1422724 CCTCAAGGGTGATGGTCTTGCCAGTCAGGCTCTTCACAAAGATCTGCAT 1422772 >seq132 Length=3652367 Score = 91.5 bits (100), Expect = 9e-14 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || ||| ||| || ||||| || || ||||| || || || Sbjct 468663 AGACGAAGAACCAAGTGCAGGGTGGACTCTTTCTGAATATTTTAGTCTGAGAGAGTGCGG 468604 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || ||||| || ||||| || | | |||| ||||| || || | |||||| Sbjct 468603 CCATCCTCTAGCTGTTTGCCCGCAAAAATCAGATGCTGATGGTCAGGTGGGATGCCCTCC 468544 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||| ||| | ||| || | ||| ||||| | ||| | || | ||| Sbjct 468543 TTGTCTTGGAT-TTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAATCTCAAGGGT 468485 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || || || |||||||| |||||||| Sbjct 468484 GATGGACTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 468446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314684897971382