Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq402 150 2e-31 >seq402 Length=911058 Score = 150 bits (166), Expect = 2e-31 Identities = 130/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||| |||||| || || || ||||| |||||||||| |||||||| | ||| Sbjct 128537 GATCTTCCTTCGATGGCCCTGCCTCCATGCCATGCCCTCTGCCAGTTCTACGTGGTGAAC 128596 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || | || | ||||||||| |||| ||||| ||| Sbjct 128597 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGCCGACATGGGGCTAGGTGTGCCCTTC 128656 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| ||||||||||| || Sbjct 128657 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 128697 Score = 150 bits (166), Expect = 2e-31 Identities = 130/161 (81%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || || |||||||| ||||| |||| |||| Sbjct 128697 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCTAGCCCC 128638 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| | || | || || ||||||||||||||||| || ||| | |||||||| ||| Sbjct 128637 ATGTCGGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 128578 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| ||||| || || || |||||| ||| ||||| Sbjct 128577 CAGAGGGCATGGCATGGAGGCAGGGCCATCGAAGGAAGATC 128537 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| || | || || || |||||| ||| |||| ||||||||||| | ||||| | Sbjct 126138 CCACAAATGCTAAAGAACTGTCGTCCAAGGGAGTGAGAATCTGGGACGCCAATGGGTCCC 126197 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTC 34411 | ||||| |||||||| | ||| ||| ||| | | | || || || || ||||| || Sbjct 126198 GTGACTTCCTGGACAACCTGGGATTCTCCAGC-AGAAAAGAAGGAGATTTAGGCCCCGTT 126256 Query 34412 TACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || || |||||||| || |||||||| || || Sbjct 126257 TATGGCTTTCAGTGGAGGCATTTTGGGGCAGACTA 126291 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || |||||||| || || || || ||||| || || || || | Sbjct 126291 TAGTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATCTCCTTCTTTT 126232 Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | | ||| ||| ||| | |||||||| ||||| || ||||| | ||||||||||| | Sbjct 126231 CT-GCTGGAGAATCCCAGGTTGTCCAGGAAGTCACGGGACCCATTGGCGTCCCAGATTCT 126173 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 ||| ||| |||||| || || || | || |||| Sbjct 126172 CACTCCCTTGGACGACAGTTCTTTAGCATTTGTGG 126138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448197099374880