Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq69 116 3e-21 seq247 109 5e-19 seq5750 96.9 3e-15 seq132 96.9 3e-15 seq1765 95.1 1e-14 seq356 95.1 1e-14 seq62 86.0 5e-12 >seq69 Length=5728823 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| || || | || | |||||| || || ||| |||||| || ||||| || || | Sbjct 4210544 GCCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGA 4210485 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGG 39175 || || || | || || ||||||||||||||||| || |||||||||||||| ||||| Sbjct 4210484 GAGAGTGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 4210425 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | | || ||| ||||| |||||| ||||| || | | || || || | ||| | Sbjct 4210424 G-ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAA 4210366 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | | | ||||| | || || ||||| || || |||||||| ||||||| Sbjct 4210365 CCGCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATCT 4210315 >seq247 Length=1816170 Score = 109 bits (120), Expect = 5e-19 Identities = 165/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| || || | || | |||||| || || ||| |||||| || ||||| || || | Sbjct 1422546 GCCACCCCTGAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGA 1422605 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGG 39175 || | || | || || ||||||||||||||||| || |||||||||||||| ||||| Sbjct 1422606 CAGAGCGCGACCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 1422665 Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235 | || ||| |||| | |||||| ||||| || | | || || || | ||||| Sbjct 1422666 G-GTGCCCTCCTTGT-CTCGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCCA 1422723 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || | ||||| | || || ||||| | || |||||||| ||||||| Sbjct 1422724 CCTCAAGGGTGATGGTCTTGCCAGTCAGGCTCTTCACAAAGATCTGCATCT 1422774 >seq5750 Length=9448 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| ||||| | |||| || || ||| |||||| || || || || |||| Sbjct 7860 CCCCCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 7919 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || |||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 7920 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 7979 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||| || |||| || | | || || || | ||| || Sbjct 7980 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 8039 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || | ||||| | || || |||| || || || ||||| |||||| Sbjct 8040 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATC 8087 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | |||| || || ||| |||||| || || || || |||| Sbjct 8544 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 8603 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || |||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 8604 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 8663 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||| || |||| || | | || || || | ||| || Sbjct 8664 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 8723 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || || |||| ||||| || ||||| ||||| Sbjct 8724 TCGAGGGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 8770 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | |||| || || ||| |||||| || || || || |||| Sbjct 8088 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 8147 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || |||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 8148 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 8207 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||| || |||| || | | || || || | ||| || Sbjct 8208 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 8267 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || | ||||| | || || |||| || || || ||||| |||||| Sbjct 8268 TCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATC 8315 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | |||| || || ||| |||||| || || || || |||| Sbjct 8316 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 8375 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || |||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 8376 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 8435 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||| || |||| || | | || || || | ||| || Sbjct 8436 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 8495 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || | ||||| | || || |||| || || || ||||| |||||| Sbjct 8496 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATC 8543 >seq132 Length=3652367 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| |||||| || ||||| || || | || || || | || || Sbjct 468654 ACCAAGTGCAGGGTGGACTCTTTCTGAATATTTTAGTCTGAGAGAGTGCGGCCATCCTCT 468595 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194 ||||||||||||||||| || ||| |||| ||||| |||||| | || ||| ||||| Sbjct 468594 AGCTGTTTGCCCGCAAAAATCAGATGCTGATGGTCAGGTGGG-ATGCCCTCCTTGTCTTG 468536 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||||| || | | || || || | ||| | || | ||||| || Sbjct 468535 GATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCAATCTCAAGGGTGATGGACTT 468476 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || |||| || || |||||||| ||||||| Sbjct 468475 GCCAGTCAAGGTCTTCACAAAGATCTGCATCT 468444 >seq1765 Length=41513 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | |||| || || ||| |||||| || || || || |||| Sbjct 9614 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 9673 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || |||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 9674 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 9733 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||| || |||| || | | || || || | ||| || Sbjct 9734 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 9793 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || || |||| ||||| || ||||| ||||| Sbjct 9794 TCGAGGGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 9840 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | |||| || || ||| |||||| || || || || |||| Sbjct 9158 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 9217 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 | || || |||| || ||||| ||||| ||||| || || ||||||||||| | ||| Sbjct 9218 GGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCTGGGGGG 9277 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||| || |||| || | | || || || | ||| || Sbjct 9278 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 9337 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || | ||||| | || || |||| || || || ||||| |||||| Sbjct 9338 TCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATC 9385 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | ||| | |||| || || ||| |||||| || || || || |||| Sbjct 9386 CCACCTCTCAGGCGCAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 9445 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || |||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 9446 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGG 9505 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||| || |||| || | | || || || | ||| || Sbjct 9506 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 9565 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || | ||||| | || || |||| || || || ||||| |||||| Sbjct 9566 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATC 9613 >seq356 Length=1115386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || || ||| |||||| || || || ||||| | ||| || || | || || Sbjct 17728 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 17787 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || || | ||||||||| | ||| | || || || ||| | Sbjct 17788 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGG 17847 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || ||| | || | | || || || | |||||| |||| ||||| | || Sbjct 17848 ATCTTGGCTTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 17907 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 || ||||| || || || ||||||||||| || || Sbjct 17908 CCGGTCAGGGTCTTCACGAAGATTTGCATTTTGAC 17942 >seq62 Length=6495742 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| |||||| || ||||| || || | || || || | || || Sbjct 4413313 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGGCCATCCTC 4413254 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||||||||| ||||| || || ||||||||||| | || | || ||| ||| Sbjct 4413253 CAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 4413194 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||||| || | || || || | || || || | ||||| | || Sbjct 4413193 GATTTTAGCTTTGACACTCTCAGTGGTGTCACTGGGTTCGACCTCGAGGGTGATGGTCTT 4413134 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || ||||| || || || ||||| ||||||| Sbjct 4413133 GCCAGTCAGGGTCTTCACGAAGATCTGCATCT 4413102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429484590296102