Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq402 138 8e-28 >seq402 Length=911058 Score = 138 bits (152), Expect = 8e-28 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || ||||||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| Sbjct 128709 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 128650 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || ||||||||||| | ||||||||||| ||||| || || ||||| || | Sbjct 128649 ACACCTAGCCCCATGTCGGCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 128590 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 ||||| ||||| || | ||| ||||| ||||| || ||||| Sbjct 128589 ACGTAGAACTGGCAGAGGGCATGGCATGGAGGCAGGGCCAT 128549 Score = 87.8 bits (96), Expect = 1e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| ||||| || ||||||||||| || || || || || || || | || Sbjct 126301 CATATCTTTGTAGTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACGGGGCCTAAATC 126242 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 ||| |||| ||| ||| ||| ||||||| ||||| | ||| || |||||||| Sbjct 126241 TCCTTCTTTTCTGCTGGAGAATCCCAGGTTGTCCAGGAAGTCACGGGACCCATTGGCGTC 126182 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||| | || ||||| || || ||||| | |||||||| || Sbjct 126181 CCAGATTCTCACTCCCTTGGACGACAGTTCTTTAGCATTTGTGGATCC 126134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369454717737674