Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq139 132 7e-26 seq93 96.9 5e-15 seq9012 95.1 2e-14 >seq139 Length=3560323 Score = 132 bits (146), Expect = 7e-26 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| |||||||||||||| || || |||||||| ||||| | || Sbjct 1651053 TGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATAAGGTTCAATGGAC 1650994 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| ||||||| ||| |||||||| |||||||| ||||| || || | | |||||| Sbjct 1650993 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 1650934 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 1650933 TTTCTTATACCAT 1650921 Score = 105 bits (116), Expect = 9e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| | |||||||| || ||| Sbjct 1623627 GTGCCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 1623568 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || || || || ||||| || || | ||| | ||||||| Sbjct 1623567 TATGTTTCAATAGCAGCATCGATATCTTCTTCGTGAATCCCCACAGATACCCTCATCAAC 1623508 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 ||||| || ||||||||| || Sbjct 1623507 ATATGTTGTGGTCTTTCAGCC 1623487 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || || || | || | ||| Sbjct 1634482 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 1634423 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| |||||||| | || || ||||||| || Sbjct 1634422 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 1634363 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || || || || || | |||||||||| Sbjct 1634362 TCCAGGTAAATAGCAAATGCTCCAGGTCG 1634334 >seq93 Length=4592439 Score = 96.9 bits (106), Expect = 5e-15 Identities = 178/257 (69%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 |||||| || ||||| || ||||| | |||||||| |||| | | ||| |||||| Sbjct 2488804 TCCAGTAGAACCAAAACCCCCTGAGC--CCCTTTCAGTGTCATCCAAAACTTGAACTTCC 2488861 Query 45934 TTCAGATCAGGATAATATATACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATTT 45993 | | || |||||| | || |||| | | || || || || |||| ||||| | ||| Sbjct 2488862 TCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCATT-TTT 2488920 Query 45994 ATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATCT 46053 | |||||| | ||||| ||| ||| | | | || |||| | |||||||||||| Sbjct 2488921 ACTTCAAAATTTTCTTTGCCAAAATTAAATAATACAACACCAAGATTTCCTCTATAATCT 2488980 Query 46054 TCATCTATTACTCCCCCTCCCACATCGATA---CCTTTTAGAGACAGTCCAGATCTAGGA 46110 |||||||| || || |||| ||||| ||| |||| || || | || | ||| Sbjct 2488981 TCATCTATAACACCAGCTCCTACATCTATAAAGTGTTTTGCAGCCAAGCTGGAACGTGGA 2489040 Query 46111 GCTATTCTTCCATAACA 46127 ||| ||||||||| || Sbjct 2489041 GCTCCTCTTCCATAGCA 2489057 >seq9012 Length=6576 Score = 95.1 bits (104), Expect = 2e-14 Identities = 240/357 (67%), Gaps = 21/357 (6%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 |||||| || ||||| || ||||| | |||||||| |||| | | ||| |||||| Sbjct 4718 TCCAGTAGAACCAAAACCCCCTGAGC--CCCTTTCAGTGTCATCCAAAACTTGAACTTCC 4775 Query 45934 TTCAGATCAGGATAATATA-TACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATT 45992 | | || |||||| | | | |||| | | || || || || |||| ||||| | || Sbjct 4776 TCTATTTCTGGATAAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCATT-TT 4834 Query 45993 TATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATC 46052 || |||||| | ||||| ||| ||| | || | || |||| | ||||||||||| Sbjct 4835 TACTTCAAAATTTTCTTTGCCAAAATTAAATAGTACAACACCAAGATTTCCTCTATAATC 4894 Query 46053 TTCATCTATTACTCCCCCTCCCACATCGATA---CCTTTTAGAGACAGTCCAGATCTAGG 46109 ||||||||| || || |||| || || ||| |||| || || | || | || Sbjct 4895 TTCATCTATAACACCAGCTCCTACGTCTATAAAGTGTTTTGCAGCCAAGCTGGAACGTGG 4954 Query 46110 AGCTATTCTTCCATA----ACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCA 46165 |||| ||||||||| ||||| || | || ||| |||| || ||||| | | Sbjct 4955 AGCTCCTCTTCCATAGCACCCAGAA----GGAAGAGCTATCTGAATGTCAGTTTTCAGAA 5010 Query 46166 ATCTCCTTTCTCCA--GGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCC 46220 | |||||||| || || || || || || || |||||| | | ||||| || Sbjct 5011 GGGT--TTTCTCCATGGGTGGCATTGTGTAATCATAGGCACTGGACAGGTCATAGCC 5065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694567604122560