Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq115 102 8e-17 seq9 87.8 2e-12 seq24 84.2 2e-11 >seq115 Length=3908719 Score = 102 bits (112), Expect = 8e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || | |||||| ||||| || | ||| ||||| | |||| ||| | Sbjct 3778544 CTTCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATCAGACCTCTTTTCT 3778485 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||| ||||| ||||| ||||| || || |||||||| || || ||||| ||||||| Sbjct 3778484 TTAACCAGAATATAGCAGCGAATGAGCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 3778425 Query 23651 CCAC 23654 |||| Sbjct 3778424 CCAC 3778421 >seq9 Length=18579217 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||||||| |||||| || |||| |||||||||||| |||||||||||| ||||||| Sbjct 13338857 CTCCCGGGCTCAAGCGATCCTCCAGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 13338916 Query 8465 AGCCACCACGCCAAGCTA-ATTT 8486 ||||||||||| |||| |||| Sbjct 13338917 CGCCACCACGCCCGGCTATATTT 13338939 >seq24 Length=11218282 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || |||| |||||||||||| |||||||||||| ||||||| Sbjct 3497838 CTCCTGGGCTCAAGCGATCCTCCAGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 3497897 Query 8465 AGCCACCACGCCAAGCTAATTTTTGTATTTT 8495 |||||| ||| |||| |||| || |||| Sbjct 3497898 CGCCACCGTGCCCGGCTAGTTTTGGTTTTTT 3497928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521412032235600