Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq66 125 1e-23 >seq66 Length=6061426 Score = 125 bits (138), Expect = 1e-23 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| ||||||||||||||||| || || |||||| ||| ||| | || Sbjct 2069910 TCTTACCCCATGACCCAGTCCTTTAGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 2069969 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 |||||| || ||||| || ||| |||| || |||||||| || || |||||||||||||| Sbjct 2069970 AAACTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCAAATTTGTGCCCTGGGGATC 2070029 Query 9769 GGGAGTGAA 9777 ||| |||| Sbjct 2070030 AGGAATGAA 2070038 Score = 116 bits (128), Expect = 5e-21 Identities = 196/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 || || || || ||||| | |||| ||||||||||| | || | |||| ||| Sbjct 2067269 GGGCAGCCTTTCACGTTATTGCAGATGAGAGACTGAATGGAGGCAGTGTTGATGATTTTA 2067328 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||||| || ||||| || ||||| ||||||||||| || || || || || Sbjct 2067329 AAACCCACTTCACCGCCAAAAGTGCTAGGCTTCCAGTAGTGAGGAGAACATATAGGATTG 2067388 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 |||| || ||||| ||||| || || || |||| || | ||| ||||||| |||||| Sbjct 2067389 CCCATCAGTCCTTTCAGGGAAAAGGGGGCTCCCAGTTCTACCATGGTCTCACCAAAGATG 2067448 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 | || || |||| ||| |||| | | | ||||||||||| || || | ||| Sbjct 2067449 CTATCTGGGCGAGGCTCTTCTACCAGAAGAGCAGGGTACAGCTCCATGGCGTCAATGTCA 2067508 Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 || || || || | || ||||| || ||||| |||||||| Sbjct 2067509 CCATAGAGCGCTTCTAACTCCGCAGCCATTTCCTTCTCTCCTGT 2067552 Score = 104 bits (114), Expect = 3e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | ||||| || || || | || || ||||| ||| || | Sbjct 2070536 TCACCTTTCACACCCATGGGAGTCGGGCAGTCATCAGCCACAGGAGGAAGAGCTCTGGTA 2070595 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 |||||||||||||| || || |||||||||||| || |||||| || ||||| | Sbjct 2070596 TAATAGGAGAGATTCGAAAAGGCTTCCCAGCTTTTATAGCCGTAGTGTGCATTGTACGTT 2070655 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || ||||||||||||||||| ||||| |||| Sbjct 2070656 GGTGGGCTGTCAATCAAATCTGATCTGGCTGA 2070687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716772368972160