Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq18 149 8e-31 seq227 87.8 2e-12 >seq18 Length=14577598 Score = 149 bits (164), Expect = 8e-31 Identities = 464/719 (65%), Gaps = 17/719 (2%) Strand=Plus/Plus Query 155742 GTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGTTTCA 155801 || ||||| || || || | || || ||||||||||| |||||| |||| || || || Sbjct 7326572 GTGGATTGTGCCGCTCGCATCAGACCCTCCAATTCAGCACCGCTGAAATTCTTGGTCTCT 7326631 Query 155802 ACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGATTTCATT-TTAGC 155860 ||| | || || | |||||||| | || | || || | |||| || || Sbjct 7326632 GTGGCCAGTTCTTTAATATCTACGTCTGCAGAGAGTAACCGATGCCCTCTCATCCTTGGC 7326691 Query 155861 AACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTT 155920 ||| || | | ||||| || | || |||||||| ||||| || ||||| || || Sbjct 7326692 TGTGTGGACGTGAAGGATTTGTAGTCAACCTTTTTCATCTGGTAAGCCTATTTCCATTTT 7326751 Query 155921 CAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCAT 155980 | ||||| | ||||||| | | ||||| || || | || |||||||||||||| Sbjct 7326752 AACTTCCAGTCTTCCAGGTCGAAGGAGAGCTTCATCTATCAGATCTGGTCTGTTGGTCAT 7326811 Query 155981 ACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATT 156040 || |||| ||| |||||||| | |||||| ||||| ||||| |||| ||||| || Sbjct 7326812 TCCAATGACTAAGATGTTGTTCAGCTGTTCTACCCCGTCAATTTTGGACAGCAATTGGTT 7326871 Query 156041 GACTACGGCGTCGTG----CGTGGCGTTATCA---------CCGCGTTTTTTACACAGAG 156087 ||| || | ||| || | | | | || || || | | || || | | Sbjct 7326872 GACGACAGTGTCATGGACTCCT-GTGCTACCAGCCATGCTCCCTCTCTGCTTGCAGATGG 7326930 Query 156088 CATCTATTTCATCGAAGACGATAACGTGTAATCCGCTGGCTAAACCCAATTTNNNNNNNN 156147 |||| |||||||| |||| ||| | ||| || || ||| ||| | || Sbjct 7326931 CATCAATTTCATCAAAGATGATGATGTGCAAACCACTGTTAGCACCAAGCTTCCTTTGCT 7326990 Query 156148 NNNNNNNAGCCTCTTGAAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGT 156207 ||| || ||| | | | | ||||||| | ||||| | ||||| |||| Sbjct 7326991 CCTCTTCAGCATCAGCAAAGAGTTTACGAATGTTAGCTCCTGATTCTCTCACATCTTTGC 7327050 Query 156208 TTAATAATTCAGGACCGTTAACTATTTTGACGGGTCGTG-ATTTAAAAGCTTGAGCGATA 156266 | | ||| || || || || | |||| || || ||| || | |||| | || Sbjct 7327051 CAAGAATTTCTGGCCCATTGACCACTTTGGGCTCTCTTGCATTCAACATCTTG-CCAATC 7327109 Query 156267 CAGCGAGCCATTAATGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATA 156326 ||||||| | || ||||| || || | || || ||||||| | ||||| | | Sbjct 7327110 TGTCGAGCCAAGAGAGTCTTACCACAACCTGTGGGCCCATATAACAGGATGCCTTTAACA 7327169 Query 156327 TGTTTACAACCTAATTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTT 156386 ||||| ||||| | | ||| || ||| | |||| || ||||| ||| || | Sbjct 7327170 TGTTTGCAACCCATCTGTTCCACAATCTCTGCAGGAAACATTCAGGAAGAAAACATTCGT 7327229 Query 156387 CGAAAAATGAGAGAAAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCA 156445 ||||||| ||||||||||| |||| || || | |||||||| ||||| ||||| Sbjct 7327230 TGAAAAATATCTGAAAATTCTTTGTCCAGACCTCCTATACCCATTTTTTCAAAGTTCCA 7327288 >seq227 Length=2142380 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/175 (72%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 63720 TAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTAC 63779 |||||||| || | ||| || ||| ||| | || || || |||||||| || || Sbjct 1924155 TAAAATAAGGGTACGCTCTGTTAGAATTCCACAGATTGGAGACAAATTTGCCAGTTG-AC 1924097 Query 63780 A-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAG 63838 | | |||||| ||||| |||||||| ||| ||||||| ||||||||||| ||| | Sbjct 1924096 ATGGTCAAAAGGGTACTTGTGGTATTCAGTATAGACAAGAGGATATGCCTTTCACCTGCG 1924037 Query 63839 ACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGAC 63893 | || ||| || ||| || |||| ||||| || || | ||| ||||||||| Sbjct 1924036 AAGGAATCACTCCTGATATCATCATAAATCCCCATGCCATCCCCTCTCGTATGAC 1923982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666978023820240