Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myotis_20lucifugus_20[refseq_20GCF_5F000147115.1_202010-09-14] 11,654 sequences; 2,034,575,300 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq5750 138 1e-27 seq1765 138 1e-27 seq62 120 3e-22 seq356 114 1e-20 seq24 111 1e-19 seq61 98.7 9e-16 seq9 93.3 4e-14 seq477 87.8 2e-12 >seq5750 Length=9448 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| |||||||| ||||||||| |||| || Sbjct 7878 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCC 7937 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||| ||||| ||||| | ||| | || ||| ||||| | Sbjct 7938 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 7997 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || || || Sbjct 7998 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 8057 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 8058 CCGGTCAAGGTCTTCACGAAGATCTGCAT 8086 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| |||||||| ||||||||| |||| || Sbjct 8106 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCC 8165 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||| ||||| ||||| | ||| | || ||| ||||| | Sbjct 8166 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 8225 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || || || Sbjct 8226 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 8285 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 8286 CCAGTCAAGGTCTTCACGAAGATCTGCAT 8314 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| |||||||| ||||||||| |||| || Sbjct 8334 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCC 8393 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||| ||||| ||||| | ||| | || ||| ||||| | Sbjct 8394 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 8453 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || || || Sbjct 8454 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 8513 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 8514 CCGGTCAAGGTCTTCACGAAGATCTGCAT 8542 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| |||||||| ||||||||| |||| || Sbjct 8562 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCC 8621 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||| ||||| ||||| | ||| | || ||| ||||| | Sbjct 8622 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 8681 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || || || Sbjct 8682 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 8741 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| || || ||||| |||||||| Sbjct 8742 CCGGTCAAGGTTTTCACGAAGATCTGCAT 8770 >seq1765 Length=41513 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| |||||||| ||||||||| |||| || Sbjct 9404 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCC 9463 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||| ||||| ||||| | ||| | || ||| ||||| | Sbjct 9464 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 9523 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || || || Sbjct 9524 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 9583 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 9584 CCGGTCAAGGTCTTCACGAAGATCTGCAT 9612 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| |||||||| ||||||||| |||| || Sbjct 9632 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCGTCTTCC 9691 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| ||||| ||||| ||||| | ||| | || ||| ||||| | Sbjct 9692 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 9751 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || || || Sbjct 9752 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 9811 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| || || ||||| |||||||| Sbjct 9812 CCAGTCAAGGTTTTCACGAAGATCTGCAT 9840 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| |||||||| |||||||| |||| || Sbjct 9176 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACGGGGTGCGCCCGTCTTCC 9235 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| ||||| ||||| | ||| | || ||| ||||| | Sbjct 9236 AGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGG 9295 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || || || Sbjct 9296 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 9355 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| ||||| |||||||| Sbjct 9356 CCAGTCAAGGTCTTCACGAAGATCTGCAT 9384 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 41684 TTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGT 41743 || |||||||| ||||||||| |||| || |||||||||||||| || ||||| ||||| Sbjct 8978 TTGTAGTCGGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGC 9037 Query 41744 TGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCG 41803 ||||| | ||| | || ||| ||||| ||| || ||| | | | ||||| Sbjct 9038 TGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCA 9097 Query 41804 CTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| ||||| | || || || || || |||| ||||| ||||| |||||||| Sbjct 9098 CTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 9156 >seq62 Length=6495742 Score = 120 bits (132), Expect = 3e-22 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||| ||||| ||| ||| |||||||| || ||||| || Sbjct 4413331 GCCCCCTCGCAGACGAGGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGA 4413272 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| | || || ||||| |||||||| || ||||||||||| ||||| | || Sbjct 4413271 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAAAATCAGGCGCTGCTGGTCAGGCGG 4413212 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA---GTGTCGCTCGACTC 41811 | || |||| || | || |||| |||| || || | || ||||| || | || Sbjct 4413211 GATGCCCTCCCGGT-CTTGGATTTTAGCTTTGAC-AC-TCTCAGTGGTGTCACTGGGTTC 4413155 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || || || || || ||||| ||||| ||||| |||||||| Sbjct 4413154 GACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 4413104 >seq356 Length=1115386 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | ||||| | ||||| ||||| ||| ||| ||||| ||||| || || Sbjct 17478 ACAGCCACCCCTCAGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATC 17537 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| |||| || ||||||||||| || || || || | ||| ||||| | Sbjct 17538 AGAAAGAGTGCGGCCGTCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 17597 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTC 41811 ||| | || ||||| ||| ||| || ||||| | | || || || | ||| Sbjct 17598 GGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTATCACTGGGCTC 17657 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| || || || || || ||||| ||||| ||||| |||||||| Sbjct 17658 CAACTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 17708 Score = 114 bits (126), Expect = 1e-20 Identities = 160/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| ||||| ||| ||| ||||| ||||| || || || || ||||| Sbjct 17719 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 17778 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || || || | ||| ||||| | ||| | || ||| Sbjct 17779 CCATCTTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCC 17838 Query 41765 TTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 || ||| || | || |||| ||| | | ||||| || | ||||||||||| || Sbjct 17839 TTATCC-TGGATCTTGGCTTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGT 17897 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || ||||| ||||| ||||| || ||||| || Sbjct 17898 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 17939 >seq24 Length=11218282 Score = 111 bits (122), Expect = 1e-19 Identities = 95/116 (82%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| |||||||| |||||| || |||| | Sbjct 4792613 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGTGCCCGTCTTTC 4792554 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 ||||||||||||||||| ||||| ||||| |||| || ||| | || ||| ||||| Sbjct 4792553 AGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGT-CGGGGGGATGCCCTCTTTGTC 4792499 >seq61 Length=6843585 Score = 98.7 bits (108), Expect = 9e-16 Identities = 92/116 (79%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| || || ||||| ||||| |||||||| ||||||||||| || || Sbjct 3345262 ACCAGGTGCAGAATGGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCTCATCTTCC 3345203 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 ||||||||||| ||||| ||||| ||||| || || | ||| | || ||| ||||| Sbjct 3345202 AGCTGCTTGCCAGCGAAGATCAGCCGCTGCTGCTCAG-GGGGATGCCCTCTTTGTC 3345148 >seq9 Length=18579217 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| ||||| ||| ||| ||||| ||||| ||||| || || ||||| Sbjct 12243747 AGACGGAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGG 12243688 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || || || | ||| ||||| | || | || ||| Sbjct 12243687 CCATCTTCCAGCTGCTTGCCTGCAAAGATGAGACTCTGCTGGTCAGGAGGGATGCCTTCC 12243628 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 || ||| ||| || ||||| | | || || | | ||| |||| || || Sbjct 12243627 TTATCCTGGATCTTAGCCTTCACATTCTCAATGGTATCACGAGGCTCAACCTTCAGGGTG 12243568 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| ||||| || ||||| Sbjct 12243567 ATGGTCTTGCCGGTCAG-GTCTTCACGAAGATTTGCAT 12243531 >seq477 Length=669466 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| ||||| || ||||||| | || | Sbjct 639943 ACCAGGTGCAGAGTGGGCTCTTTCTGGATGTTGTAGTCAGACAGGGTGCCCA--TCTTGC 639886 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| | || | ||||| || ||| ||||| | Sbjct 639885 AGCTGCTTGCCAGCAAAGATCAGTCTCTGCTCATCAGAGGGAATGCCCTCTTTGTCTTGG 639826 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || || ||| Sbjct 639825 ATCTTGACCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTA 639766 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| ||||| || || |||||||| Sbjct 639765 TCAGTCA--GTCTTCACAAAGATCTGCAT 639739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462236653864800