Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 210 2e-49
seq7842 84.2 2e-11
>seq7767
Length=50048226
Score = 210 bits (232), Expect = 2e-49
Identities = 596/906 (66%), Gaps = 20/906 (2%)
Strand=Plus/Minus
Query 16629 CATCCAATGAAAATGTGTTATCTTGTTTATGA-ACAACACCCATTCTTTGGTAATCGCTA 16687
||||||| | ||| | || | ||| | ||| | || ||||| || || || || |
Sbjct 16036790 CATCCAAGGTAAAAGAATTCTGTTGGATTTGACATCACTCCCATCCTCTGATACTCACCT 16036731
Query 16688 ACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAA 16747
|| | || || || ||||| | || || || || |||||||||||||| |||||
Sbjct 16036730 ACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATTCTCCATGAAGTCAAAT 16036676
Query 16748 GGATTAG-TAG-CTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTA 16805
||||| || ||||||| || | | || || || || | || | || |
Sbjct 16036675 GGATTTTCTACTCTGAAAACCTTGCCAA--AACCTAGCTCCAGCATAAGTCGGTGTGCCA 16036618
Query 16806 CAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAG 16865
|||| || ||| | || |||||| ||| ||||| || || || | || | |
Sbjct 16036617 CAAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAGCTTCAGGGGCAAGG 16036558
Query 16866 CTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCA---ACTC 16922
||||| | || | |||||||| ||| || | ||||||| | | ||||
Sbjct 16036557 TCTCCGTGAGGAACCCCTGCTCTATCCGAACGGCAT---TAATAATTATTTCCTTCACTC 16036501
Query 16923 GTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTA 16982
| || ||| ||| | || || ||||| |||||||| || || || || || ||||
Sbjct 16036500 TCTGCTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTA 16036441
Query 16983 ATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTT 17042
| ||||| |||||||| |||||||| || ||||| | || |||||| | ||||
Sbjct 16036440 AACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCATCAGGTCACGTT 16036381
Query 17043 TCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAA 17102
|||| | ||| ||||||| || || || ||||||||||| || || || || | ||||
Sbjct 16036380 TCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAA 16036321
Query 17103 ACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACT 17162
| | | | ||||| |||| || || ||||||| | | |||| | | |||| |
Sbjct 16036320 AGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCAGTCCAATGCAAGGCCCAGT 16036261
Query 17163 CGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTC 17220
| || || | ||||| ||| ||| || || | ||| || | | || ||| |||| |
Sbjct 16036260 CTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAAATTCCCTTTCT- 16036202
Query 17221 CTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTC 17280
|| | || | | ||| || || ||||| || |||||||| || || || ||||| ||
Sbjct 16036201 TTGGA-ATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAATGGATGTTTTC 16036143
Query 17281 CATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAA 17340
|||||| || | || || || || || |||||||| | || |||||||| | ||
Sbjct 16036142 CATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAA 16036083
Query 17341 TCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATG 17400
|| ||| | | ||||| || || ||||| || |||| || || || |||| | ||
Sbjct 16036082 CCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAGCCAGAACGTG 16036023
Query 17401 CTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATAT 17460
| || ||| | || || || | || | || || | || ||||| |
Sbjct 16036022 GGATAGAAAGTATCTCTCCTCAGGCTTCAGGGATTCCTGGTGCTGAATGTCCTTGGAAAG 16035963
Query 17461 ATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATC 17520
|||||| ||||| | |||||||| |||| | || || | |||||| | |||||||||
Sbjct 16035962 ATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACATCTGCCAAATATC 16035903
Query 17521 ATTGTA 17526
|| |||
Sbjct 16035902 ATGGTA 16035897
>seq7842
Length=42459490
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||| |||||||| |||||||| || ||||| || | || |||||| || |||||||
Sbjct 7548465 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 7548406
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||| | || || || ||||||||||| || || || || | ||||| |
Sbjct 7548405 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 7548346
Query 17106 C 17106
|
Sbjct 7548345 C 7548345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517494673512960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |