Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7820 446 1e-120 seq7825 394 7e-105 seq7858 223 2e-53 seq7810 188 5e-43 seq7725 132 3e-26 seq7771 87.8 1e-12 >seq7820 Length=31847680 Score = 446 bits (494), Expect = 1e-120 Identities = 441/569 (78%), Gaps = 2/569 (0%) Strand=Plus/Minus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||||| |||||||||||||||||||||||||||||||| | |||||| || || | | Sbjct 25920367 ATTAATCCTTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGATGT 25920308 Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087 ||||||||||| || ||||||| || |||||| | ||||| | ||||| |||| ||| Sbjct 25920307 CAGAAAGAACACCTGCATATTCTGGCAGAAGTTTTT--TTCTCCAAATCAATTTCTTGAA 25920250 Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATG 4147 |||| || || |||||| || ||||| ||||| |||||||| ||| |||||| || || Sbjct 25920249 AAAATACGTTACTTTCAAATTCCTGCATAATCCTTGTCACAAATAGTCTAAGATGGCCTG 25920190 Query 4148 GATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTT 4207 | | |||| ||||| |||| |||||||| ||||| |||||| |||||||| |||| Sbjct 25920189 GTTTGTTCATGGCTTCCTTATGAACAGAACTGCCTCCCGCTATCCAAACCATGTCCACTT 25920130 Query 4208 TATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAA 4267 | ||||||||||||| || || ||| |||||| |||||||| | ||| || || | || Sbjct 25920129 TGTTTGCTAATTCTGATTGCTCAATAAATTTTAATGCATCATCCAGACTTTTGGCAAGAA 25920070 Query 4268 AATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTT 4327 || |||||| |||||| | ||||| || || |||||||||| | |||||||||| | | Sbjct 25920069 AAGGAGCTCCTTGTGGAGGTTCCTTGAGGTCTCTGCTGAGAACTAAATTAATTCTGTCCT 25920010 Query 4328 TTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAAT 4387 ||||||| | |||||||| ||||| |||||||| |||| ||||||||||||| |||| Sbjct 25920009 TTAAAGGTTGATTCTTCTCGGGAATAGAGAACCATATCTTCCTACCCATAATCACCAAAT 25919950 Query 4388 TCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCA 4447 |||||||| || ||| || || || || ||||||||||||||| | || |||||| Sbjct 25919949 TCTGTTTACCTTCTACTGAGGAGGTTGTGGTCATTCTTTGGAAAAACATGAATTCATTCC 25919890 Query 4448 TAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAA 4507 | || ||||| ||||||| || | ||||| |||||| |||| || | ||||| Sbjct 25919889 TGAGCGGGGGCCAGGGCAAGTCCCCGTTCTTGCCGATGCCCGTGTTCTGGGACACAGCGG 25919830 Query 4508 CAATGCAGTTTAGTGCTTGAACCATAATA 4536 ||||||||||| ||||||| ||| Sbjct 25919829 TGATGCAGTTTAGCCTACGAACCATGATA 25919801 >seq7825 Length=26217151 Score = 394 bits (436), Expect = 7e-105 Identities = 422/554 (76%), Gaps = 18/554 (3%) Strand=Plus/Plus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 ||| || ||||||||||||||||||||||||||| ||||| | || ||| || || |||| Sbjct 25203685 ATTCATCATTCTTCTCATATACTTCAAATTTGTATTTAATGCCTTCCTCCTCCTGGACAT 25203744 Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087 ||||||||||| ||| | |||||| |||||||| | || || |||||||| Sbjct 25203745 CAGAAAGAACACCTGGG---------AGAAGTTTTTATTTCTCCAAATTAATTTCTGGAA 25203795 Query 4088 AAAAG-GTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCAT 4146 |||| ||||||| |||||| || |||| |||| |||||||| ||||||| | || | Sbjct 25203796 AAAAACGTGTCACTTTCAAATTCCTGCACATTCCTTGTCACAAATAGTTTAACGTGGCCT 25203855 Query 4147 GGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACT 4206 || | |||| ||||| ||||| |||||||| |||| | |||||| |||||||| ||| Sbjct 25203856 GGCTTGTTCATGGCTTCCTTATAAACAGAACTGACTCCCACTATCCAAACCATGTCCACT 25203915 Query 4207 TTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAA 4266 ||||||||||||||||| || || || |||||| |||||||| | ||| || || | | Sbjct 25203916 TTATTTGCTAATTCTGG-TGCTCAAAAACTTTTAAGGCATCATCCAGACTTTTGGCAAGA 25203974 Query 4267 AAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCT 4326 ||||||||| | ||||| |||||| || || ||||| || | || ||||||| | Sbjct 25203975 AAATGAGCT-TCTGTGGGGGCTCCTCAAGGTC---TCTGAGCACTAAATCAATTCTGTCC 25204030 Query 4327 TTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAA 4386 |||||||| || |||||||| ||||| |||||||| ||||| ||||||||||||| ||| Sbjct 25204031 TTTAAAGGTCGATTCTTCTCGGGAATAGAGAACCATGTCTTCCTACCCATAATCACCAAA 25204090 Query 4387 TTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTC 4446 ||||||||| | | | || || | || ||||||||| |||||| || || |||||| Sbjct 25204091 TTCTGTTTACC---TTCTGAGGAGGATGTGGTCATTCTTCGGAAATACTTGAACTCATTC 25204147 Query 4447 ATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCA 4506 | | | ||||| ||| || || | |||| |||||| |||| | || ||||| Sbjct 25204148 CTGAATGAGGGCCACAGCAGGTCCCCATTCTTGCTGATGCCCCTGTTCTTAGACACAGCG 25204207 Query 4507 ACAATGCAGTTTAG 4520 | ||||||||||| Sbjct 25204208 AGGATGCAGTTTAG 25204221 >seq7858 Length=29646629 Score = 223 bits (246), Expect = 2e-53 Identities = 395/588 (67%), Gaps = 71/588 (12%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || || ||| |||||| | ||||||||||||||| |||||||| | ||| Sbjct 10028949 AAAACACCTTCACATGAATCATTCTTTTTATATACTTCAAATTTCTACTTAATGCCTTTT 10029008 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || ||| ||||||||||||||| |||||| | ||| ||||||||| | | | Sbjct 10029009 TCCTCCTGGACACCAGAAAGAACACTTGGGTATTCTGGAAGAAGCTTGTATTTCCCCAAA 10029068 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| ||||| |||||| |||| || ||||||| ||| Sbjct 10029069 TCAATTTCTGTAAAAAATGTGTTACTTTCAAAG------------------------AGT 10029104 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 || |||| || ||| | || | ||||| ||||| |||||||| ||||| | |||||| Sbjct 10029105 TTGAGATGGCTTGGCTTGTTCGTGGCTTCCTTATAAACAGAACTGCCTCCCACTATCCAA 10029164 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGT--------TCG---------------- 4230 |||||||| ||||| |||| ||||||||| | | ||| Sbjct 10029165 ACCATGTCCACTTTCTTTGTTAATTCTGGTTATTATGTATATCGTGGTTATATTTTTGTG 10029224 Query 4231 --------------GTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTC 4276 |||||||||| ||||||| | ||| || |||| ||| ||||| | Sbjct 10029225 TACTTGAAGAGTTAATAAGTTTTAAGGCATCATGCAGACTTTTGGCTAGAAAGTGAGCGC 10029284 Query 4277 TATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCC 4336 |||||| | ||||| | ||| | |||||||| | ||||||||| | | |||||| | Sbjct 10029285 CTTGTGGAGGTTCCTTGA-TTCTCTCCTGAGAACTAAGTTAATTCTGTCCTCTAAAGGTC 10029343 Query 4337 GGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTA- 4395 |||||||| |||| |||| || ||| | ||||||||||||| ||||||| |||| Sbjct 10029344 AGTTCTTCTAGGGAAGAGAGAGTCATGTCCTCCTACCCATAATCACAAAATTCTATTTAC 10029403 Query 4396 -----TCT-GGTACAGAA-GATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCAT 4448 | | |||| || ||| | ||||||||| |||||| | || |||||| | Sbjct 10029404 AAAATTATAATTACAAAATTCTGTTCTGGTCATTCTTGGGAAATACCTGAATTCATTCCT 10029463 Query 4449 AAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTG 4496 | ||||| || | ||| | | ||||| ||||||| |||||| Sbjct 10029464 GGATGGGGGCCAGGGTAGGTTTCTGTTCTTGCCTATGCCCACGTTTTG 10029511 >seq7810 Length=26004092 Score = 188 bits (208), Expect = 5e-43 Identities = 187/242 (77%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990 |||| ||| | || | | | |||||||| || ||||| |||||||| || | ||| ||| Sbjct 11655467 AGCTCTTAAGCCACGTGGCGCACAATGGGGGTGACGCAGGTGCAGCCCACGGCCACCAGC 11655408 Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050 |||||||| |||| || || | |||||| | ||| | | | |||| || || ||| Sbjct 11655407 ATCTTCTCCAGCCGGAAGGAGTGGGGGCAGTGCTGAGACTCCCTTCGCAGAACAAGGATC 11655348 Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110 ||||| ||||| ||||| |||||||||||||||| || ||||| |||||||| ||||| Sbjct 11655347 TCTTGCTGGATGGGGACAGAGTTCATGTGGTAGTTTATCTTCCCTTCAGCATTGACACAG 11655288 Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170 || | || ||| ||||| || ||||| ||||||||||||||||| || | || |||||| Sbjct 11655287 CCCATGTGGCGGCACTTGGCCTCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTG 11655228 Query 27171 CG 27172 || Sbjct 11655227 CG 11655226 >seq7725 Length=84060192 Score = 132 bits (146), Expect = 3e-26 Identities = 105/126 (83%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| |||||||| ||||| | || ||| |||||||| |||||||||||||||||||| Sbjct 75639662 TTATAAACAGAACTGCCTCCTACTACCCAAACCATGTCCACTTTATTTGCTAATTCTGGT 75639603 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 || || ||||||||||| |||||||| | ||| || || | ||||||||||| |||||| Sbjct 75639602 TGCTCAGTAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCTTGTGGA 75639543 Query 4285 AGCTCC 4290 | ||| Sbjct 75639542 GGTTCC 75639537 Score = 116 bits (128), Expect = 3e-21 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| || || |||||||||| | |||||||||| | |||||||| || |||||||| || Sbjct 75632395 CTTGAGGTCTCTGCTGAGAACTAAATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCGGG 75632336 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| | ||||||||||| |||||||||||| || Sbjct 75632335 AATAGAGAACCATGTCTTCCTCCCCATAATCACCAAATTCTGTTTACCT 75632287 Score = 113 bits (124), Expect = 3e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4045 TATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCA 4104 || ||| || |||||| |||||||| | ||||| |||||||||||| ||||||| |||| Sbjct 75642808 TACTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCA 75642749 Query 4105 AAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCT 4164 || || ||||| ||||| |||||||| ||| |||||| || ||| | |||| ||||| Sbjct 75642748 AATTCCTGCATAATCCTTGTCACAAATAGTCTAAGATGGCCTGGTTTGTTCATGGCTTCC 75642689 Query 4165 TT 4166 || Sbjct 75642688 TT 75642687 Score = 95.1 bits (104), Expect = 9e-15 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||||| |||||||||||||||||||||||||||||||| | |||||| || || |||| Sbjct 75649549 ATTAATCGTTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACAT 75649490 Query 4028 TAGAAAGAACACTTGGATAT 4047 ||| ||||||| ||| ||| Sbjct 75649489 CAGATAGAACACCTGGGTAT 75649470 >seq7771 Length=57971676 Score = 87.8 bits (96), Expect = 1e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| |||||||| || ||||||||||||||||| ||||| || || || | ||| || | Sbjct 7632047 CTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCCT 7632106 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | ||||||| | || || || | || || || || ||| ||||| |||||||| | Sbjct 7632107 CTTCTCTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGA 7632166 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCC 102195 | | ||| || || || || || || || |||||||| Sbjct 7632167 TTTTCACTCCCTTTGAAGACAGTTCCTTAGCGTTTGTAGATCC 7632209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361216541559872