Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq7820 446 1e-120
seq7825 394 7e-105
seq7858 223 2e-53
seq7810 188 5e-43
seq7725 132 3e-26
seq7771 87.8 1e-12
>seq7820
Length=31847680
Score = 446 bits (494), Expect = 1e-120
Identities = 441/569 (78%), Gaps = 2/569 (0%)
Strand=Plus/Minus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
|||||| |||||||||||||||||||||||||||||||| | |||||| || || | |
Sbjct 25920367 ATTAATCCTTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGATGT 25920308
Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087
||||||||||| || ||||||| || |||||| | ||||| | ||||| |||| |||
Sbjct 25920307 CAGAAAGAACACCTGCATATTCTGGCAGAAGTTTTT--TTCTCCAAATCAATTTCTTGAA 25920250
Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATG 4147
|||| || || |||||| || ||||| ||||| |||||||| ||| |||||| || ||
Sbjct 25920249 AAAATACGTTACTTTCAAATTCCTGCATAATCCTTGTCACAAATAGTCTAAGATGGCCTG 25920190
Query 4148 GATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTT 4207
| | |||| ||||| |||| |||||||| ||||| |||||| |||||||| ||||
Sbjct 25920189 GTTTGTTCATGGCTTCCTTATGAACAGAACTGCCTCCCGCTATCCAAACCATGTCCACTT 25920130
Query 4208 TATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAA 4267
| ||||||||||||| || || ||| |||||| |||||||| | ||| || || | ||
Sbjct 25920129 TGTTTGCTAATTCTGATTGCTCAATAAATTTTAATGCATCATCCAGACTTTTGGCAAGAA 25920070
Query 4268 AATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTT 4327
|| |||||| |||||| | ||||| || || |||||||||| | |||||||||| | |
Sbjct 25920069 AAGGAGCTCCTTGTGGAGGTTCCTTGAGGTCTCTGCTGAGAACTAAATTAATTCTGTCCT 25920010
Query 4328 TTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAAT 4387
||||||| | |||||||| ||||| |||||||| |||| ||||||||||||| ||||
Sbjct 25920009 TTAAAGGTTGATTCTTCTCGGGAATAGAGAACCATATCTTCCTACCCATAATCACCAAAT 25919950
Query 4388 TCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCA 4447
|||||||| || ||| || || || || ||||||||||||||| | || ||||||
Sbjct 25919949 TCTGTTTACCTTCTACTGAGGAGGTTGTGGTCATTCTTTGGAAAAACATGAATTCATTCC 25919890
Query 4448 TAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAA 4507
| || ||||| ||||||| || | ||||| |||||| |||| || | |||||
Sbjct 25919889 TGAGCGGGGGCCAGGGCAAGTCCCCGTTCTTGCCGATGCCCGTGTTCTGGGACACAGCGG 25919830
Query 4508 CAATGCAGTTTAGTGCTTGAACCATAATA 4536
||||||||||| ||||||| |||
Sbjct 25919829 TGATGCAGTTTAGCCTACGAACCATGATA 25919801
>seq7825
Length=26217151
Score = 394 bits (436), Expect = 7e-105
Identities = 422/554 (76%), Gaps = 18/554 (3%)
Strand=Plus/Plus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
||| || ||||||||||||||||||||||||||| ||||| | || ||| || || ||||
Sbjct 25203685 ATTCATCATTCTTCTCATATACTTCAAATTTGTATTTAATGCCTTCCTCCTCCTGGACAT 25203744
Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087
||||||||||| ||| | |||||| |||||||| | || || ||||||||
Sbjct 25203745 CAGAAAGAACACCTGGG---------AGAAGTTTTTATTTCTCCAAATTAATTTCTGGAA 25203795
Query 4088 AAAAG-GTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCAT 4146
|||| ||||||| |||||| || |||| |||| |||||||| ||||||| | || |
Sbjct 25203796 AAAAACGTGTCACTTTCAAATTCCTGCACATTCCTTGTCACAAATAGTTTAACGTGGCCT 25203855
Query 4147 GGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACT 4206
|| | |||| ||||| ||||| |||||||| |||| | |||||| |||||||| |||
Sbjct 25203856 GGCTTGTTCATGGCTTCCTTATAAACAGAACTGACTCCCACTATCCAAACCATGTCCACT 25203915
Query 4207 TTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAA 4266
||||||||||||||||| || || || |||||| |||||||| | ||| || || | |
Sbjct 25203916 TTATTTGCTAATTCTGG-TGCTCAAAAACTTTTAAGGCATCATCCAGACTTTTGGCAAGA 25203974
Query 4267 AAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCT 4326
||||||||| | ||||| |||||| || || ||||| || | || ||||||| |
Sbjct 25203975 AAATGAGCT-TCTGTGGGGGCTCCTCAAGGTC---TCTGAGCACTAAATCAATTCTGTCC 25204030
Query 4327 TTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAA 4386
|||||||| || |||||||| ||||| |||||||| ||||| ||||||||||||| |||
Sbjct 25204031 TTTAAAGGTCGATTCTTCTCGGGAATAGAGAACCATGTCTTCCTACCCATAATCACCAAA 25204090
Query 4387 TTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTC 4446
||||||||| | | | || || | || ||||||||| |||||| || || ||||||
Sbjct 25204091 TTCTGTTTACC---TTCTGAGGAGGATGTGGTCATTCTTCGGAAATACTTGAACTCATTC 25204147
Query 4447 ATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCA 4506
| | | ||||| ||| || || | |||| |||||| |||| | || |||||
Sbjct 25204148 CTGAATGAGGGCCACAGCAGGTCCCCATTCTTGCTGATGCCCCTGTTCTTAGACACAGCG 25204207
Query 4507 ACAATGCAGTTTAG 4520
| |||||||||||
Sbjct 25204208 AGGATGCAGTTTAG 25204221
>seq7858
Length=29646629
Score = 223 bits (246), Expect = 2e-53
Identities = 395/588 (67%), Gaps = 71/588 (12%)
Strand=Plus/Plus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || || ||| |||||| | ||||||||||||||| |||||||| | |||
Sbjct 10028949 AAAACACCTTCACATGAATCATTCTTTTTATATACTTCAAATTTCTACTTAATGCCTTTT 10029008
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074
|| || || ||| ||||||||||||||| |||||| | ||| ||||||||| | | |
Sbjct 10029009 TCCTCCTGGACACCAGAAAGAACACTTGGGTATTCTGGAAGAAGCTTGTATTTCCCCAAA 10029068
Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134
|||| ||||| |||||| |||| || ||||||| |||
Sbjct 10029069 TCAATTTCTGTAAAAAATGTGTTACTTTCAAAG------------------------AGT 10029104
Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194
|| |||| || ||| | || | ||||| ||||| |||||||| ||||| | ||||||
Sbjct 10029105 TTGAGATGGCTTGGCTTGTTCGTGGCTTCCTTATAAACAGAACTGCCTCCCACTATCCAA 10029164
Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGT--------TCG---------------- 4230
|||||||| ||||| |||| ||||||||| | | |||
Sbjct 10029165 ACCATGTCCACTTTCTTTGTTAATTCTGGTTATTATGTATATCGTGGTTATATTTTTGTG 10029224
Query 4231 --------------GTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTC 4276
|||||||||| ||||||| | ||| || |||| ||| ||||| |
Sbjct 10029225 TACTTGAAGAGTTAATAAGTTTTAAGGCATCATGCAGACTTTTGGCTAGAAAGTGAGCGC 10029284
Query 4277 TATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCC 4336
|||||| | ||||| | ||| | |||||||| | ||||||||| | | |||||| |
Sbjct 10029285 CTTGTGGAGGTTCCTTGA-TTCTCTCCTGAGAACTAAGTTAATTCTGTCCTCTAAAGGTC 10029343
Query 4337 GGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTA- 4395
|||||||| |||| |||| || ||| | ||||||||||||| ||||||| ||||
Sbjct 10029344 AGTTCTTCTAGGGAAGAGAGAGTCATGTCCTCCTACCCATAATCACAAAATTCTATTTAC 10029403
Query 4396 -----TCT-GGTACAGAA-GATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCAT 4448
| | |||| || ||| | ||||||||| |||||| | || |||||| |
Sbjct 10029404 AAAATTATAATTACAAAATTCTGTTCTGGTCATTCTTGGGAAATACCTGAATTCATTCCT 10029463
Query 4449 AAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTG 4496
| ||||| || | ||| | | ||||| ||||||| ||||||
Sbjct 10029464 GGATGGGGGCCAGGGTAGGTTTCTGTTCTTGCCTATGCCCACGTTTTG 10029511
>seq7810
Length=26004092
Score = 188 bits (208), Expect = 5e-43
Identities = 187/242 (77%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990
|||| ||| | || | | | |||||||| || ||||| |||||||| || | ||| |||
Sbjct 11655467 AGCTCTTAAGCCACGTGGCGCACAATGGGGGTGACGCAGGTGCAGCCCACGGCCACCAGC 11655408
Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050
|||||||| |||| || || | |||||| | ||| | | | |||| || || |||
Sbjct 11655407 ATCTTCTCCAGCCGGAAGGAGTGGGGGCAGTGCTGAGACTCCCTTCGCAGAACAAGGATC 11655348
Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110
||||| ||||| ||||| |||||||||||||||| || ||||| |||||||| |||||
Sbjct 11655347 TCTTGCTGGATGGGGACAGAGTTCATGTGGTAGTTTATCTTCCCTTCAGCATTGACACAG 11655288
Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170
|| | || ||| ||||| || ||||| ||||||||||||||||| || | || ||||||
Sbjct 11655287 CCCATGTGGCGGCACTTGGCCTCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTG 11655228
Query 27171 CG 27172
||
Sbjct 11655227 CG 11655226
>seq7725
Length=84060192
Score = 132 bits (146), Expect = 3e-26
Identities = 105/126 (83%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224
||||| |||||||| ||||| | || ||| |||||||| ||||||||||||||||||||
Sbjct 75639662 TTATAAACAGAACTGCCTCCTACTACCCAAACCATGTCCACTTTATTTGCTAATTCTGGT 75639603
Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284
|| || ||||||||||| |||||||| | ||| || || | ||||||||||| ||||||
Sbjct 75639602 TGCTCAGTAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCTTGTGGA 75639543
Query 4285 AGCTCC 4290
| |||
Sbjct 75639542 GGTTCC 75639537
Score = 116 bits (128), Expect = 3e-21
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || || |||||||||| | |||||||||| | |||||||| || |||||||| ||
Sbjct 75632395 CTTGAGGTCTCTGCTGAGAACTAAATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCGGG 75632336
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398
||| |||||||| ||||| | ||||||||||| |||||||||||| ||
Sbjct 75632335 AATAGAGAACCATGTCTTCCTCCCCATAATCACCAAATTCTGTTTACCT 75632287
Score = 113 bits (124), Expect = 3e-20
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4045 TATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCA 4104
|| ||| || |||||| |||||||| | ||||| |||||||||||| ||||||| ||||
Sbjct 75642808 TACTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCA 75642749
Query 4105 AAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCT 4164
|| || ||||| ||||| |||||||| ||| |||||| || ||| | |||| |||||
Sbjct 75642748 AATTCCTGCATAATCCTTGTCACAAATAGTCTAAGATGGCCTGGTTTGTTCATGGCTTCC 75642689
Query 4165 TT 4166
||
Sbjct 75642688 TT 75642687
Score = 95.1 bits (104), Expect = 9e-15
Identities = 69/80 (86%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
|||||| |||||||||||||||||||||||||||||||| | |||||| || || ||||
Sbjct 75649549 ATTAATCGTTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACAT 75649490
Query 4028 TAGAAAGAACACTTGGATAT 4047
||| ||||||| ||| |||
Sbjct 75649489 CAGATAGAACACCTGGGTAT 75649470
>seq7771
Length=57971676
Score = 87.8 bits (96), Expect = 1e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| |||||||| || ||||||||||||||||| ||||| || || || | ||| || |
Sbjct 7632047 CTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCCT 7632106
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| ||||||| | || || || | || || || || ||| ||||| |||||||| |
Sbjct 7632107 CTTCTCTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGA 7632166
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCC 102195
| | ||| || || || || || || || ||||||||
Sbjct 7632167 TTTTCACTCCCTTTGAAGACAGTTCCTTAGCGTTTGTAGATCC 7632209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361216541559872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |