Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 324 2e-83
seq7820 241 2e-58
seq7870 131 2e-25
seq7842 129 7e-25
seq7786 111 2e-19
>seq7767
Length=50048226
Score = 324 bits (358), Expect = 2e-83
Identities = 421/579 (73%), Gaps = 5/579 (1%)
Strand=Plus/Minus
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
||||| ||||||| || || || || ||||||| |||||| ||||| ||||| | |||
Sbjct 16036474 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 16036415
Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239
||||||||| || | || ||||| ||| |||| || || ||||| ||||| | ||||||
Sbjct 16036414 TTGGAAAACATGGGGCCAGGCATCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAA 16036355
Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---A 24296
|| ||||||||||| |||||||| || || |||||| | | || | ||| || || |
Sbjct 16036354 GAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTA 16036295
Query 24297 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356
| | |||| |||| | ||||| || |||||||| |||||||||||||||
Sbjct 16036294 GCCTCTTTGTCCCCAGTCCAATGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATT 16036235
Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416
||||| | || || |||||| | | |||| || |||||||||||| || |||||
Sbjct 16036234 GTCTCGAGGGCGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATG 16036175
Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476
| ||||| ||||| || ||||| |||||||| ||||| ||| | || || ||||||||
Sbjct 16036174 AGGAGACTGTACATCTCAGAATGGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAG 16036115
Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536
| || || |||||||| |||||| | ||| || || | || |||||||| |||||
Sbjct 16036114 CGGGCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATG 16036055
Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 24596
|| ||||| | ||||| || |||| || || || ||| ||| | || || || |
Sbjct 16036054 CCATCACTCGGCGCAAAGAAAGCCAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTC 16035995
Query 24597 AGTTTATTCC-AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 24655
|| ||||| | | || || || || | |||||| ||||| |||||||||| ||
Sbjct 16035994 AG-GGATTCCTGGTGCTGAATGTCCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGA 16035936
Query 24656 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 24694
||||| || || | |||||| | ||| || ||||| ||
Sbjct 16035935 AGCCTCAGCTTTCTCATACATCTGCCAAATATCATGGTA 16035897
>seq7820
Length=31847680
Score = 241 bits (266), Expect = 2e-58
Identities = 421/607 (69%), Gaps = 12/607 (2%)
Strand=Plus/Minus
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
||||| ||||||| || || || | | ||||| |||||| ||||| ||||| | ||
Sbjct 14843668 TGTTTGAACATCAGGCAGGCAAAGTTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCA 14843609
Query 24180 TTGGAAAAC-GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 24238
||||||||| | ||| || ||||| |||| | || || ||||| ||||| |||||| |
Sbjct 14843608 TTGGAAAACCGCGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGA 14843549
Query 24239 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA--- 24295
|| ||| ||||| | |||||||| || |||||| | | | | ||| || ||
Sbjct 14843548 AGAACCAAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGT 14843489
Query 24296 ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 24355
| | | |||| | ||| ||||| || |||||||| || ||||||||||
Sbjct 14843488 AGCCTCTTTGTCCCCAACCCAACGCAAGGCCCAGTCTGCCTTCTTCCTTCCACAAGGCAT 14843429
Query 24356 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 24415
|||||| || | || |||||| | | | | || || |||||||| ||| || ||| |
Sbjct 14843428 TGTCTCGATGGTGTTGAAGAGAAATTCTGTCTCTTTGGAATCTTTAATATAAGTGTCAGT 14843369
Query 24416 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 24475
| |||||| |||| || ||||| |||||||| ||||| ||||| || || ||||||||
Sbjct 14843368 GAGGAGACTACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACA 14843309
Query 24476 TCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTAT 24535
| || || || |||| |||||| | | | || || | || |||||||| |||||
Sbjct 14843308 GCAGGCTTCTGTCATCTCAACTTCTTGGCCACACCGCTCCACCAAGTTTTCATTTACTAT 14843249
Query 24536 TCCGTCACTGGCTGCAAAAAACGCC--AAT----ACATGTTTTATAAAATATTTTTCGTC 24589
|| |||| || ||||| || ||| ||| || || |||||||| | | || ||
Sbjct 14843248 GCCAACACTCGCCGCAAAGAAAGCCAGAATGTGAACGTGGGGTATAAAATCTCTCTCCTC 14843189
Query 24590 TGGTGTTAGTTTATTCCAATCATTG-ATATCTTTAGATATATCCACTTCTTCCACTGTCC 24648
|| | || ||||| | ||| || || || || | || ||| ||||| ||||||
Sbjct 14843188 AGGCTTCAG-CGATTCCCAGTGTTGAATGTCCTTGGAAAGATTCACCTCTTCAGCTGTCC 14843130
Query 24649 AAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAA 24708
|||| || ||||| || || ||| | || | ||| | ||||| || | || || || |
Sbjct 14843129 AAAAGGAAGCCTCAGCTTTCTTACATATCTGCCAAAGATCATGGTACTTCATAGGGAAGA 14843070
Query 24709 TAACAAA 24715
| |||||
Sbjct 14843069 TGACAAA 14843063
>seq7870
Length=10551609
Score = 131 bits (144), Expect = 2e-25
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209
|| ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| |
Sbjct 10335168 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 10335109
Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 10335108 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 10335049
Query 53270 CTATTTCTAAGACCGTA 53286
|| ||||| | ||| ||
Sbjct 10335048 CTGTTTCTTATACCATA 10335032
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934
|||| ||||| ||||||||||| || |||||| ||| | || || || || ||||| |
Sbjct 10337845 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 10337786
Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994
||| |||||| |||||||| ||||| || || || || || ||||| || | | || |
Sbjct 10337785 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 10337726
Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045
| |||| ||||||||| | ||| ||||||| | |||| | || || ||||
Sbjct 10337725 TCTGTGAAATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 10337675
Score = 104 bits (114), Expect = 3e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447
|||| || || ||||| || | || || || || ||||| || || || || || || |
Sbjct 10330155 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCAT 10330096
Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507
||||||||||||| ||||||| |||||| || || ||||| | || ||||| ||||
Sbjct 10330095 AATAAATGGTTTCAAAGATCTGCTTATTCAGTAGCTGGGCTTCTGGACTCTCAAAAGGAT 10330036
Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567
| | | |||||||| || ||||| | ||||| || || || || || || | ||| |
Sbjct 10330035 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGGCGATGGC 10329976
Query 53568 TCTTATTAGA 53577
||||| ||
Sbjct 10329975 ATTTATTTGA 10329966
Score = 100 bits (110), Expect = 3e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084
|| |||||||||||| |||||||| ||||||||||| || | || || || |||| |
Sbjct 10325159 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 10325100
Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144
||||| || |||||||| ||||| || | ||| || ||| | | ||| || |||||||
Sbjct 10325099 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCA 10325040
Query 54145 CGGTTCCAAGTATAT 54159
|| |||| ||| ||
Sbjct 10325039 AGGCTCCAGGTAAAT 10325025
Score = 93.3 bits (102), Expect = 5e-14
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827
|||| || | ||| |||||||||||||| | || || ||||| || || || || || |
Sbjct 10311658 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACGGCAATCCTTGCTGCCAGGA 10311599
Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887
||||||| || ||||| | || || | || || ||| | || || | || ||| || |
Sbjct 10311598 TGGCATAGTCAGGATGCTTAGTCGTCAAGGTCGCAGCTGTCTCAGCAGCCAAAGTATCTA 10311539
Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933
||| || || || || ||| | |||| |||||||| || |||||
Sbjct 10311538 GTTCCACAGTGGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 10311493
>seq7842
Length=42459490
Score = 129 bits (142), Expect = 7e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| ||||| ||||| | ||| |||||||||||||| || ||||| ||||| || || |
Sbjct 7548465 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 7548406
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| ||||| |||||||| || ||||||||||| |||||||| || || ||||| |
Sbjct 7548405 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 7548346
Query 24277 CAATAAGTCTTTCTCC 24292
| | || | ||||||
Sbjct 7548345 CCACAACCCGTTCTCC 7548330
>seq7786
Length=83011774
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218
|| ||||| || || | ||| ||||||||||||||||||||||| || || | || ||
Sbjct 48121152 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 48121211
Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278
||||| ||||| | ||||| ||||| || |||||||| |||||||| || ||||| ||
Sbjct 48121212 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAGCC 48121271
Query 24279 ATAAGTCTTTCTCC 24292
| | |||||| ||
Sbjct 48121272 ACCACTCTTTCCCC 48121285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593663177794560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |