Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 93.3 4e-14
seq7858 87.8 2e-12
seq7857 82.4 7e-11
seq7828 82.4 7e-11
>seq7767
Length=50048226
Score = 93.3 bits (102), Expect = 4e-14
Identities = 149/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|| ||||| || ||| | ||||| | ||||| || ||||| ||| ||| || |||
Sbjct 33066959 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCC 33066900
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || | ||| || ||| ||||| ||||| | || |||
Sbjct 33066899 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 33066840
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| || ||||| |||||||| ||||| |||||||||||| ||| || | || |||
Sbjct 33066839 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 33066780
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGT 29172
|| ||||| ||||| ||||||||||| | ||||
Sbjct 33066779 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGT 33066746
>seq7858
Length=29646629
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 28963 TGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAG 29022
|||| || ||| | ||||| | ||||| || ||||| ||| ||| | |||||| | |
Sbjct 12424960 TGCAGATTTTCCTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGG 12424901
Query 29023 AGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAAC 29082
| || | | || | || || ||| ||||| ||||| | || ||||| |
Sbjct 12424900 ATACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGC 12424841
Query 29083 AAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATA 29142
| ||||| ||| |||| ||||| ||||||||| || ||| || | || ||||| |
Sbjct 12424840 AGAGACTGATCGTTGCTGGCAAGCAACTGGAAAATGGATGCACTTTGTCTGACTACAACA 12424781
Query 29143 TTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
|||| ||||| ||||||||||| | |||||
Sbjct 12424780 TTCAAAAGGAGTCTACTCTTCATCTTGTGTT 12424750
>seq7857
Length=43258702
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|| ||||| || ||| | ||||| | | ||| || ||||| || ||| | ||||||
Sbjct 24177952 AAGATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCC 24178011
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | || | ||| || ||| ||||| ||||| | || |||
Sbjct 24178012 TCGGATACAATACAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 24178071
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| || ||| | |||||||| ||||| |||||||||||| ||| || | || |||
Sbjct 24178072 CAGCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTAC 24178131
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| | ||| ||||| || |||||||| | |||||| || | || || ||
Sbjct 24178132 AACACTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACTTCGTGGTGG 24178181
>seq7828
Length=21597463
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|| ||||| || ||| | ||||| | ||||| || ||||| || ||| ||||||
Sbjct 14213589 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCC 14213530
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || | ||| || ||| |||| ||||| | || |||
Sbjct 14213529 TCGGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 14213470
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| || ||||| |||||||| ||||| |||||||||||| || || | || |||
Sbjct 14213469 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTCCTTTGTCTGACTAC 14213410
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
|| ||||| ||||| || |||||||| | |||||
Sbjct 14213409 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 14213375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428294905444160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |