Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq7763 343 2e-89 seq7771 178 2e-39 seq7759 174 2e-38 >seq7763 Length=5490626 Score = 343 bits (380), Expect = 2e-89 Identities = 631/914 (69%), Gaps = 27/914 (3%) Strand=Plus/Minus Query 176340 CTAGCAGCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGC 176399 |||| ||| || | | ||| | |||||| || |||||| | |||| || ||||| Sbjct 173358 CTAGGAGCCCAATTCTTGCCCCCACTGTATTCCCTGGTGTTTGTGGTTGGTCTGCTGGGC 173299 Query 176400 AATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATG 176459 ||| | | |||||| | || |||| | ||||| || | || | | || ||||| Sbjct 173298 AATGTGGTGGTGGTGGTGATCCTCATGAAATACAAGAGGCTCTGGATTATGACCAACATC 173239 Query 176460 TTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATG 176519 || ||| | || ||||| || ||||||||||| ||||| || || || || ||||| Sbjct 173238 TTCCTGCTCAATTTGGCCATTTCTGACTTGCTCTTTCTATTCACCCTGGTGTTCTGGATT 173179 Query 176520 CACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGG 176579 |||||| || || |||| ||| |||||| |||| ||||||| || ||| Sbjct 173178 CACTATGCTGA---GTCGAATGAATGGGTTTTTGGCCCTTCCATGTGTAAGCTTCTCTCT 173122 Query 176580 GGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGAC 176639 || | | |||| || | ||||| || |||||| |||||||||||| || ||||| Sbjct 173121 GGGCTTTATTACGTGGGCTTATACAGTGAGATCTTTTTCATCATCCTGCTGACCATAGAC 173062 Query 176640 AGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTG 176697 |||| || || | ||| ||||||| ||| || ||| | || || || | || Sbjct 173061 CGGTACCTGGCCATCGTCCATGCTGTGTTTGCCCTTCGAGCCC--GGACTGTCACTTTTG 173004 Query 176698 GCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTT 176757 | | | || |||| |||||| |||||||| | |||||||||||||| Sbjct 173003 GTGTCATCACGAGTGTTCTCACCTGGGGCATGGCAGGGCTAGCAGCCCTCCCTGAATTTA 172944 Query 176758 TCTTTCATGGACACCAAGATGA----CAATGGTAGGGTTCAGTGTGATC--CTTACTACC 176811 |||| |||| | |||| | || ||| || || || || || || |||| Sbjct 172943 TCTTCCATGAATCCCAAAAAGAGGCCCAACAGT----TT--GTCTGCTCACCTATTTACC 172890 Query 176812 CAGAGATGTCTACAA-ATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGT 176870 |||| | | | || | |||| ||| ||| | | | ||| ||| | || Sbjct 172889 CAGA-AGACCAAGAAGACAGATGGAAGCGTTTCCATGCTCTGAGAATGAATATCCTGGGT 172831 Query 176871 CTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTG 176930 |||||| ||||| ||||||| |||| ||| ||||||| || |||||| | || ||| || Sbjct 172830 CTCATTCTGCCTTTGCTCATCATGGTTGTTTGCTACTCTGGAATTATTAAAACGCTGCTG 172771 Query 176931 AGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCC 176990 || ||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||| | Sbjct 172770 AGATGCCCCAGTAAGAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTC 172711 Query 176991 TATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACC 177050 | ||| |||| ||||||||||||||| | || ||||| || || | ||||| | | Sbjct 172710 TTTTTCATTTTCTGGACACCCTACAACCTGGTCCTCCTCCTCTCGGCTTTTCAAACGA-T 172652 Query 177051 CTTCTT---AACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACA 177107 |||||| ||| | ||| ||| ||||| | ||||| |||| ||| | | || Sbjct 172651 CTTCTTTGAGACCAGTTGTGAGCA--GAGCAAACAGCTGGACGTGGCCATGCAGGTGACG 172594 Query 177108 AAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAG 177167 | | |||||||| ||||| ||| ||||||| | ||||| || ||||| |||||| Sbjct 172593 GAGGTGATCGCCTACACGCACTGCTGCGTCAACCCCATCATCTATGCCTTCGTTGGGGAG 172534 Query 177168 AAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAG 177227 | ||| || | ||||| | ||||||||||| || ||||||||| |||||| |||| Sbjct 172533 AGGTTCAGGAAGCACCTCTGCCACTTCTTCCGCAGGCACGTGGCCACCTACCTGGGCAAA 172474 Query 177228 TACATCCCCTTCCT 177241 |||||||| ||||| Sbjct 172473 TACATCCCATTCCT 172460 Score = 343 bits (380), Expect = 2e-89 Identities = 631/914 (69%), Gaps = 27/914 (3%) Strand=Plus/Minus Query 9454 CTAGCAGCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGC 9513 |||| ||| || | | ||| | |||||| || |||||| | |||| || ||||| Sbjct 173358 CTAGGAGCCCAATTCTTGCCCCCACTGTATTCCCTGGTGTTTGTGGTTGGTCTGCTGGGC 173299 Query 9514 AATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATG 9573 ||| | | |||||| | || |||| | ||||| || | || | | || ||||| Sbjct 173298 AATGTGGTGGTGGTGGTGATCCTCATGAAATACAAGAGGCTCTGGATTATGACCAACATC 173239 Query 9574 TTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATG 9633 || ||| | || ||||| || ||||||||||| ||||| || || || || ||||| Sbjct 173238 TTCCTGCTCAATTTGGCCATTTCTGACTTGCTCTTTCTATTCACCCTGGTGTTCTGGATT 173179 Query 9634 CACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGG 9693 |||||| || || |||| ||| |||||| |||| ||||||| || ||| Sbjct 173178 CACTATGCTGA---GTCGAATGAATGGGTTTTTGGCCCTTCCATGTGTAAGCTTCTCTCT 173122 Query 9694 GGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGAC 9753 || | | |||| || | ||||| || |||||| |||||||||||| || ||||| Sbjct 173121 GGGCTTTATTACGTGGGCTTATACAGTGAGATCTTTTTCATCATCCTGCTGACCATAGAC 173062 Query 9754 AGGTATCTAGCTGTTGTCTATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTG 9811 |||| || || | ||| ||||||| ||| || ||| | || || || | || Sbjct 173061 CGGTACCTGGCCATCGTCCATGCTGTGTTTGCCCTTCGAGCCC--GGACTGTCACTTTTG 173004 Query 9812 GCATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTT 9871 | | | || |||| |||||| |||||||| | |||||||||||||| Sbjct 173003 GTGTCATCACGAGTGTTCTCACCTGGGGCATGGCAGGGCTAGCAGCCCTCCCTGAATTTA 172944 Query 9872 TCTTTCATGGACACCAAGATGA----CAATGGTAGGGTTCAGTGTGATC--CTTACTACC 9925 |||| |||| | |||| | || ||| || || || || || || |||| Sbjct 172943 TCTTCCATGAATCCCAAAAAGAGGCCCAACAGT----TT--GTCTGCTCACCTATTTACC 172890 Query 9926 CAGAGATGTCTACAA-ATGTTTGGAGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGT 9984 |||| | | | || | |||| ||| ||| | | | ||| ||| | || Sbjct 172889 CAGA-AGACCAAGAAGACAGATGGAAGCGTTTCCATGCTCTGAGAATGAATATCCTGGGT 172831 Query 9985 CTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTG 10044 |||||| ||||| ||||||| |||| ||| ||||||| || |||||| | || ||| || Sbjct 172830 CTCATTCTGCCTTTGCTCATCATGGTTGTTTGCTACTCTGGAATTATTAAAACGCTGCTG 172771 Query 10045 AGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCC 10104 || ||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||| | Sbjct 172770 AGATGCCCCAGTAAGAAAAAGTACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTC 172711 Query 10105 TATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACC 10164 | ||| |||| ||||||||||||||| | || ||||| || || | ||||| | | Sbjct 172710 TTTTTCATTTTCTGGACACCCTACAACCTGGTCCTCCTCCTCTCGGCTTTTCAAACGA-T 172652 Query 10165 CTTCTT---AACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACA 10221 |||||| ||| | ||| ||| ||||| | ||||| |||| ||| | | || Sbjct 172651 CTTCTTTGAGACCAGTTGTGAGCA--GAGCAAACAGCTGGACGTGGCCATGCAGGTGACG 172594 Query 10222 AAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAG 10281 | | |||||||| ||||| ||| ||||||| | ||||| || ||||| |||||| Sbjct 172593 GAGGTGATCGCCTACACGCACTGCTGCGTCAACCCCATCATCTATGCCTTCGTTGGGGAG 172534 Query 10282 AAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAAG 10341 | ||| || | ||||| | ||||||||||| || ||||||||| |||||| |||| Sbjct 172533 AGGTTCAGGAAGCACCTCTGCCACTTCTTCCGCAGGCACGTGGCCACCTACCTGGGCAAA 172474 Query 10342 TACATCCCCTTCCT 10355 |||||||| ||||| Sbjct 172473 TACATCCCATTCCT 172460 >seq7771 Length=57971676 Score = 178 bits (196), Expect = 2e-39 Identities = 136/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 7629512 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 7629571 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| ||||||||||| || | |||||||||||| ||||| ||||| ||| | || Sbjct 7629572 ACACCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACC 7629631 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| ||| ||||| || || |||||||| Sbjct 7629632 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCAT 7629672 >seq7759 Length=36627259 Score = 174 bits (192), Expect = 2e-38 Identities = 134/157 (85%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 || |||| |||||||| ||||||||| || ||||||||||||||||||||||| | ||| Sbjct 5668467 CAACGCCGCAGCCTCAGCCTGAGGGTCTTCAGCTTTTCCCCCAGGGAGTTCACATGTTCC 5668526 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 || || | || | ||||||||| |||||||||||||||||||||||||| |||||| Sbjct 5668527 TTGA--TGTTTGGGTC-GTGGTTCTCAGCCTGGGGCATCACCTCCTCCAGGTAGAACTGG 5668583 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 5668584 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 5668620 Score = 113 bits (124), Expect = 5e-20 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||| |||||||||| | |||||||||| ||||||||||| ||||||||||||||||| Sbjct 5666207 TCAGATTTTCATCTTCATTGTCATGTAGGTTTCTATGTAGTTGATGAAGATGTCAAACTC 5666266 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| ||| | || ||||||| Sbjct 5666267 ACTCATGGCTTTGTAGACACCTCTCTCTTGGAGCT 5666301 Score = 107 bits (118), Expect = 2e-18 Identities = 129/169 (76%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 ||| || ||||| ||||||| |||||| || | |||||| ||||||||||||||||||| Sbjct 5669759 AAAAAAAGTCTTCACCCTGCCGAAGGCAGCTCGGAGCTCTCGGAGCATGTGGGGCAGGCT 5669818 Query 138357 GG-TGGGCAATGTAGGGCAGTCGTCCCCAGACTCACTGTCATAT-TTGTTGTC-GGCCCA 138413 || |||| | || | ||||| |||| |||| || | | | ||| | | ||| | Sbjct 5669819 GGCTGGGAAGTG-GGTGCAGTTGTCCTCAGA--CAGGGCGCTCTGGTGTCGGCTGGCTCC 5669875 Query 138414 CACCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATG 138462 |||||||||||||| ||||||||||||||||| | || ||| |||| Sbjct 5669876 TACCCCGGCCAGGAGGACCAGGCAACACAGCAGTGCTGGGCTGGGCATG 5669924 Score = 82.4 bits (90), Expect = 9e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 138015 CTTGCTGAAGGCGCTCTTCACCTGCTCCACGGCCTTGCTCTTATTCTCGCAGGGCAGGAA 138074 ||| || ||||| ||||||||||||||||| ||||||||||||||||| |||||||| || Sbjct 5667367 CTTACTAAAGGCACTCTTCACCTGCTCCACCGCCTTGCTCTTATTCTCACAGGGCAGAAA 5667426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590018736442880