Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq7778 266 4e-66
seq7798 174 2e-38
seq7850 154 2e-32
seq7818 138 1e-27
seq7787 105 8e-18
seq7843 89.7 6e-13
>seq7778
Length=3768631
Score = 266 bits (294), Expect = 4e-66
Identities = 261/337 (77%), Gaps = 0/337 (0%)
Strand=Plus/Minus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
|||||||| |||||||| ||||| | | ||| | ||||| ||||||||||||||
Sbjct 1336648 AGCAGGGCTTCGATGTCAGGCTCGATATTGATGGTGGGAAAGCGGCGGCTGTACCTGCGC 1336589
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
|| ||| || || | ||||||| ||||||||| ||||||||||| | ||||||||||
Sbjct 1336588 ACAGGCACACCATCCGGGCCCACCAGGAACTTCTCAAAGTTCCAGGCGATGTCGTTGCGG 1336529
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
||||| |||||||||| |||| || ||||||| ||| ||||| | ||||| ||
Sbjct 1336528 CACACGGGAGACCAGGTGATGAACTTGGGGTCGGTCATGAGCGCAGTGGCATCGTCACTG 1336469
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
|| || ||||||| ||| || |||||||||||||| || || ||| || ||||| |||
Sbjct 1336468 GGGGCTGGCAGGGACTCCCGCAGGAAGGCGAAGAGGGGGTGCGCCTGCGCGCCGTTCACC 1336409
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
||||||||||| || ||| | ||||| |||||||| ||| ||||| ||||||| |||
Sbjct 1336408 TCGCACTTCTCAAAAAGCGTGAAGTTGGGCTCGAACCCGCCGCCAGGTCGGACGTACTTG 1336349
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393
|||||| || |||||| | |||| ||||| ||||
Sbjct 1336348 AGGGAATTCAGGATCTCTTCGTTCTTAGCGTTCTCCT 1336312
Score = 196 bits (216), Expect = 6e-45
Identities = 170/211 (81%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
|||| || ||||||||||| |||||||| || ||||| ||||| ||||| | || ||||
Sbjct 1336095 CCTGATGCCCGAACTGGTTGCACGGGAAGCCGAGCACAACCAGGCCCCGGGGCCCGAGGC 1336036
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
|||||||||||||||||||||| ||||| ||||||||||| | |||||||| ||||| |
Sbjct 1336035 GCCGCTGCAGCTCGTTCATCTGGGTGTAGTCCCGGACCGTTGTGCCTCAGAGCGACGCCA 1335976
Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570
| ||||||||||||| ||| |||||| | | | || | ||||| || || || ||||
Sbjct 1335975 CATTCTCGATGAGCAGCACCTTGCCCCGCAGGGAACCCAGGCTCAGGGGCTCCCCGCCGG 1335916
Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601
| |||||| || |||||||| ||||| ||
Sbjct 1335915 CCAGCGGGCGCGCAGAGAAGGCATACACGGA 1335885
>seq7798
Length=36517248
Score = 174 bits (192), Expect = 2e-38
Identities = 366/545 (67%), Gaps = 52/545 (10%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCA-GCGGTGGCTGTACCTGCG 83115
|||||||| |||||||| ||||||| | | |||| | || | ||||||| |||||
Sbjct 34785687 AGCAGGGCTTCGATGTCAGGCTCCATATTCGATGGCTGGAAAGCAGCGGCTGTAGCTGCG 34785746
Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175
||| ||| || |||| |||| |||| |||| | ||||||||||
Sbjct 34785747 CACAGGCACACCATCAGG--------------TCTCAAAGTCCCAGACGACGTCGTTGCA 34785792
Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCT 83235
|| ||| |||||| || |||| || ||||| | ||| ||||| | ||| ||||
Sbjct 34785793 GCCCACCAGAGACCGGGTGATGAACTTGGGGTTGGTCATGAGCGCG---ATGGCGTC--- 34785846
Query 83236 AGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCAC--CGTTG 83293
|| ||| ||||||| || || ||| ||||| | ||
Sbjct 34785847 -----------------CT------AAGACGAAGAGGGGGTGCGCC--TGCACGCCATTC 34785881
Query 83294 ACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGG-ACGTG 83352
||||||| ||| ||| | || | ||| |||| || ||| | | || || |||||
Sbjct 34785882 ACCTCGCCCTTTTCGGAAGGCGAGAGGTTGGGCTGGA-GCCAGCCACGGGCTGGGACGTG 34785940
Query 83353 CTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACA 83412
|| |||||| || |||||| | | | |||||||||||| || | ||| |||| |
Sbjct 34785941 CTCGAGGGAATTCAGGATCTCTTCGCTTTTGGCGTTTTCCTGATGCCTGAAATGGTGGCG 34786000
Query 83413 CGGGAACCCAAGCACTACCAGCCCCCGAGCTCCT-AGGCGCCGCTGCAGCTCGTTCATCT 83471
|||| || ||||| ||||| ||| | | |||| |||||||||||||||| ||||||||
Sbjct 34786001 GCGGAAGCCGAGCACGACCAGGCCCTG-GGTCCTGAGGCGCCGCTGCAGCTGGTTCATCT 34786059
Query 83472 GAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCC 83531
| ||||| |||| |||| | |||||||| || || || |||| || ||||| |||
Sbjct 34786060 GGGTGTAATCCCAGACCTTTGGGCCTCAGAGCGAAGCCACATTCTGGAAGAGCAGCACCT 34786119
Query 83532 GGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCTGAGAAGG 83591
|||||| | | | || | ||||| || || || | || ||||| || |||||||
Sbjct 34786120 TGCCCCGCAGGCAACCCAGGCTCATGGGCTCCCCGCTGGCTGGTGGGCGCGCAGAGAAGG 34786179
Query 83592 CGTAC 83596
|| ||
Sbjct 34786180 CGGAC 34786184
>seq7850
Length=56397658
Score = 154 bits (170), Expect = 2e-32
Identities = 285/413 (69%), Gaps = 10/413 (2%)
Strand=Plus/Minus
Query 83126 CCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGA 83185
||||| | ||| || ||||||| | ||||||||| | ||| | | || ||||| ||
Sbjct 46540470 CCGTCTGGGCCCTTCAGGAACTTCCCCAAGTTCCAGCCGACGCCCTCGCCCCACACCTGA 46540411
Query 83186 GACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCT--CATGTCGTCGCTAGGCGCCG 83243
||||||| |||||| ||||| | || ||||| | |||| || || ||||| |
Sbjct 46540410 GACCAGG---TGAGCTTGGGGTGGGCCAGGAGCGCAGTGGCATGC--TCCCTGGGCGCGG 46540356
Query 83244 GCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACT 83303
| || || || | ||| | || | |||| | || |||| | | || | |
Sbjct 46540355 GGAGAGCTTCCTGCAGGCGGAGGAGGGGCGGGCGCACCTGCGCACTGCTTACGAGGTGAT 46540296
Query 83304 TCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAG 83363
|||| |||||| |||| |||||||| ||| | || | | | | | || |
Sbjct 46540295 TCTCAAAGAGCCGGAAGTCGGGCTCGAACCCGCCGCGGGGTCCTATGGTCCTGAGAGTTT 46540236
Query 83364 GCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAA 83423
|| |||||| || |||| |||||| ||||| || | | ||||||| |||||||| || |
Sbjct 46540235 -CAGGATCTCCGCCTTCTTGGCGTTCTCCTGATGCCGGCACTGGTTGCACGGGAAGCCGA 46540177
Query 83424 GCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCC 83483
||| ||||| ||||| || | |||||||||||||||| ||||| || |||| || ||
Sbjct 46540176 GCAGGACCAGGCCCCGGGC--CGAGGCGCCGCTGCAGCTTGTTCACTTGGGTGTCCTGCC 46540119
Query 83484 GGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCC 83536
||| ||| | | |||||| ||||| || | |||| |||||| ||| ||||
Sbjct 46540118 GGAGCGTCGTGCGTCAGAGCGACGCCACCTGCTCGGTGAGCAGCACCTTGCCC 46540066
>seq7818
Length=84771923
Score = 138 bits (152), Expect = 1e-27
Identities = 196/268 (73%), Gaps = 6/268 (2%)
Strand=Plus/Plus
Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468
||| ||||||| || |||| | ||| || ||| ||| ||||||||| ||| |||
Sbjct 53925523 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCGCGCCTGC 53925581
Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528
| ||| || | || || |||||||| || | || ||||||| || ||| | |||||||
Sbjct 53925582 TGGTGCACCTCTTCCCCGAGCTCTTCACGCCCGACAACCTGCGCAAGCAGTACAACTGCA 53925641
Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACTAT 50587
||||||| |||||||| |||| || |||||| ||| | | | |||| |||||
Sbjct 53925642 GCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCGTCCCGCATCAGGCTCATCCGCCACTAC 53925700
Query 50588 GTGCAGTTGCTGCACCCG-GCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGC 50646
|||||| ||||| ||||| ||| | | ||||| ||||| |||| ||||| |||
Sbjct 53925701 GTGCAGCTGCTGTACCCGCGCGCCAAG-AACGACCGCGTCTGGACGCTGGAGTTCGTGGG 53925759
Query 50647 GTGCCTGGACGAGCGCTGCCGGCGCCGC 50674
||||||||||||||||||||||||
Sbjct 53925760 CAAGCTGGACGAGCGCTGCCGGCGCCGC 53925787
>seq7787
Length=23931036
Score = 105 bits (116), Expect = 8e-18
Identities = 239/357 (67%), Gaps = 27/357 (8%)
Strand=Plus/Minus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCA-GCGGTGGCTGTACCTGCG 83115
|||||||| | || ||| |||| | | | | || |||| | |||| | ||| || ||||
Sbjct 18160180 AGCAGGGCTTTGAAGTCAGGCTGGATGTCGATGG-CTGGAACGCGGGGCCTGGAC-TGCG 18160123
Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175
||| ||| |||||| | ||||||| || |||||||| || |||||||
Sbjct 18160122 CACAGGCACGCCGTCTGGGCCCACCATGAC---------GTTCCAGGTGACATCGTTGCA 18160072
Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCG----TGCTCATGTCGT 83231
||| ||||||||||||| |||| | ||||||| || ||||| || || ||
Sbjct 18160071 GCAAACTGGAGACCAGGTGATGAATTTGGGGTCGGTCCTGAGCGCAGTGGCACA----GT 18160016
Query 83232 CGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGT 83291
| || || || ||||| | ||||||| |||||| | || || || || |
Sbjct 18160015 CACTGGGGGCAGGCAGAAC-------AGGAAGGTGAAGAGGAGTTGCACCTGAGCGCCCT 18159963
Query 83292 TGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGT 83351
| |||||||||||||| || || | || | |||||||| || || || || ||
Sbjct 18159962 TCACCTCGCACTTCTCAAAAAGGACGGAGGTGGGCTCGAACCCAACGCCGGGTTAGATGT 18159903
Query 83352 GCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGT 83408
|||| |||||| || ||| || | ||| | | || || | || | ||||||||
Sbjct 18159902 GCTTGAGGGAATTCAGGATGTCTTCGTTCCTGTCATTCTCTCGATGCCTGAACTGGT 18159846
>seq7843
Length=32746053
Score = 89.7 bits (98), Expect = 6e-13
Identities = 183/264 (69%), Gaps = 16/264 (6%)
Strand=Plus/Plus
Query 83059 CAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC-A 83117
|||||| | ||||| ||||| ||| ||| | || ||||||||||||||| | |
Sbjct 32159397 CAGGGCTTTAATGTCAGGCTCAGTGGCAGTGGTTGGAAAGTGGTGGCTGTACCTGCACCA 32159456
Query 83118 CGGGCGTG-----CCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTT 83172
| ||| || || | ||| ||| || ||||| |||||||||||| | | | |
Sbjct 32159457 TCTGGGTGGCAGACCATCTGGGCCC-CCAGGAGCTTCTTGAAGTTCCAGGCAATGCCACT 32159515
Query 83173 GCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGC---GTGCTCATGTC 83229
|| |||||||||| || || |||| || ||||| | ||| |||| ||| || ||
Sbjct 32159516 GCCTCACACTGGAGTCCTGGTGATGAACTTGGGGTTGGTCATGAGCACAGTG-GCA--TC 32159572
Query 83230 GTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTG--CA 83287
|| || | || ||||| || || | |||||||| ||||| || |||| | || ||
Sbjct 32159573 ATCACTGAGGGCAGGCAGAGCTTCCTGGAGGAAGGCAAAGAG-GGGGGTGCGCCTGCACA 32159631
Query 83288 CCGTTGACCTCGCACTTCTCGAAG 83311
| || ||||| |||||||| |||
Sbjct 32159632 CAATTCACCTCACACTTCTCAAAG 32159655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608736894394880
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