Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq7778 266 4e-66 seq7798 174 2e-38 seq7850 154 2e-32 seq7818 138 1e-27 seq7787 105 8e-18 seq7843 89.7 6e-13 >seq7778 Length=3768631 Score = 266 bits (294), Expect = 4e-66 Identities = 261/337 (77%), Gaps = 0/337 (0%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| |||||||| ||||| | | ||| | ||||| |||||||||||||| Sbjct 1336648 AGCAGGGCTTCGATGTCAGGCTCGATATTGATGGTGGGAAAGCGGCGGCTGTACCTGCGC 1336589 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 || ||| || || | ||||||| ||||||||| ||||||||||| | |||||||||| Sbjct 1336588 ACAGGCACACCATCCGGGCCCACCAGGAACTTCTCAAAGTTCCAGGCGATGTCGTTGCGG 1336529 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 ||||| |||||||||| |||| || ||||||| ||| ||||| | ||||| || Sbjct 1336528 CACACGGGAGACCAGGTGATGAACTTGGGGTCGGTCATGAGCGCAGTGGCATCGTCACTG 1336469 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 || || ||||||| ||| || |||||||||||||| || || ||| || ||||| ||| Sbjct 1336468 GGGGCTGGCAGGGACTCCCGCAGGAAGGCGAAGAGGGGGTGCGCCTGCGCGCCGTTCACC 1336409 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 ||||||||||| || ||| | ||||| |||||||| ||| ||||| ||||||| ||| Sbjct 1336408 TCGCACTTCTCAAAAAGCGTGAAGTTGGGCTCGAACCCGCCGCCAGGTCGGACGTACTTG 1336349 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 |||||| || |||||| | |||| ||||| |||| Sbjct 1336348 AGGGAATTCAGGATCTCTTCGTTCTTAGCGTTCTCCT 1336312 Score = 196 bits (216), Expect = 6e-45 Identities = 170/211 (81%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || ||||||||||| |||||||| || ||||| ||||| ||||| | || |||| Sbjct 1336095 CCTGATGCCCGAACTGGTTGCACGGGAAGCCGAGCACAACCAGGCCCCGGGGCCCGAGGC 1336036 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 |||||||||||||||||||||| ||||| ||||||||||| | |||||||| ||||| | Sbjct 1336035 GCCGCTGCAGCTCGTTCATCTGGGTGTAGTCCCGGACCGTTGTGCCTCAGAGCGACGCCA 1335976 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 | ||||||||||||| ||| |||||| | | | || | ||||| || || || |||| Sbjct 1335975 CATTCTCGATGAGCAGCACCTTGCCCCGCAGGGAACCCAGGCTCAGGGGCTCCCCGCCGG 1335916 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601 | |||||| || |||||||| ||||| || Sbjct 1335915 CCAGCGGGCGCGCAGAGAAGGCATACACGGA 1335885 >seq7798 Length=36517248 Score = 174 bits (192), Expect = 2e-38 Identities = 366/545 (67%), Gaps = 52/545 (10%) Strand=Plus/Plus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCA-GCGGTGGCTGTACCTGCG 83115 |||||||| |||||||| ||||||| | | |||| | || | ||||||| ||||| Sbjct 34785687 AGCAGGGCTTCGATGTCAGGCTCCATATTCGATGGCTGGAAAGCAGCGGCTGTAGCTGCG 34785746 Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175 ||| ||| || |||| |||| |||| |||| | |||||||||| Sbjct 34785747 CACAGGCACACCATCAGG--------------TCTCAAAGTCCCAGACGACGTCGTTGCA 34785792 Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCT 83235 || ||| |||||| || |||| || ||||| | ||| ||||| | ||| |||| Sbjct 34785793 GCCCACCAGAGACCGGGTGATGAACTTGGGGTTGGTCATGAGCGCG---ATGGCGTC--- 34785846 Query 83236 AGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCAC--CGTTG 83293 || ||| ||||||| || || ||| ||||| | || Sbjct 34785847 -----------------CT------AAGACGAAGAGGGGGTGCGCC--TGCACGCCATTC 34785881 Query 83294 ACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGG-ACGTG 83352 ||||||| ||| ||| | || | ||| |||| || ||| | | || || ||||| Sbjct 34785882 ACCTCGCCCTTTTCGGAAGGCGAGAGGTTGGGCTGGA-GCCAGCCACGGGCTGGGACGTG 34785940 Query 83353 CTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACA 83412 || |||||| || |||||| | | | |||||||||||| || | ||| |||| | Sbjct 34785941 CTCGAGGGAATTCAGGATCTCTTCGCTTTTGGCGTTTTCCTGATGCCTGAAATGGTGGCG 34786000 Query 83413 CGGGAACCCAAGCACTACCAGCCCCCGAGCTCCT-AGGCGCCGCTGCAGCTCGTTCATCT 83471 |||| || ||||| ||||| ||| | | |||| |||||||||||||||| |||||||| Sbjct 34786001 GCGGAAGCCGAGCACGACCAGGCCCTG-GGTCCTGAGGCGCCGCTGCAGCTGGTTCATCT 34786059 Query 83472 GAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCC 83531 | ||||| |||| |||| | |||||||| || || || |||| || ||||| ||| Sbjct 34786060 GGGTGTAATCCCAGACCTTTGGGCCTCAGAGCGAAGCCACATTCTGGAAGAGCAGCACCT 34786119 Query 83532 GGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGGTAATCGGGCGTGCTGAGAAGG 83591 |||||| | | | || | ||||| || || || | || ||||| || ||||||| Sbjct 34786120 TGCCCCGCAGGCAACCCAGGCTCATGGGCTCCCCGCTGGCTGGTGGGCGCGCAGAGAAGG 34786179 Query 83592 CGTAC 83596 || || Sbjct 34786180 CGGAC 34786184 >seq7850 Length=56397658 Score = 154 bits (170), Expect = 2e-32 Identities = 285/413 (69%), Gaps = 10/413 (2%) Strand=Plus/Minus Query 83126 CCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGA 83185 ||||| | ||| || ||||||| | ||||||||| | ||| | | || ||||| || Sbjct 46540470 CCGTCTGGGCCCTTCAGGAACTTCCCCAAGTTCCAGCCGACGCCCTCGCCCCACACCTGA 46540411 Query 83186 GACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCT--CATGTCGTCGCTAGGCGCCG 83243 ||||||| |||||| ||||| | || ||||| | |||| || || ||||| | Sbjct 46540410 GACCAGG---TGAGCTTGGGGTGGGCCAGGAGCGCAGTGGCATGC--TCCCTGGGCGCGG 46540356 Query 83244 GCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACT 83303 | || || || | ||| | || | |||| | || |||| | | || | | Sbjct 46540355 GGAGAGCTTCCTGCAGGCGGAGGAGGGGCGGGCGCACCTGCGCACTGCTTACGAGGTGAT 46540296 Query 83304 TCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAG 83363 |||| |||||| |||| |||||||| ||| | || | | | | | || | Sbjct 46540295 TCTCAAAGAGCCGGAAGTCGGGCTCGAACCCGCCGCGGGGTCCTATGGTCCTGAGAGTTT 46540236 Query 83364 GCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGGAACCCAA 83423 || |||||| || |||| |||||| ||||| || | | ||||||| |||||||| || | Sbjct 46540235 -CAGGATCTCCGCCTTCTTGGCGTTCTCCTGATGCCGGCACTGGTTGCACGGGAAGCCGA 46540177 Query 83424 GCACTACCAGCCCCCGAGCTCCTAGGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCC 83483 ||| ||||| ||||| || | |||||||||||||||| ||||| || |||| || || Sbjct 46540176 GCAGGACCAGGCCCCGGGC--CGAGGCGCCGCTGCAGCTTGTTCACTTGGGTGTCCTGCC 46540119 Query 83484 GGACCGTGCTACCTCAGAGGGACGCTACGTTCTCGATGAGCAAGACCCGGCCC 83536 ||| ||| | | |||||| ||||| || | |||| |||||| ||| |||| Sbjct 46540118 GGAGCGTCGTGCGTCAGAGCGACGCCACCTGCTCGGTGAGCAGCACCTTGCCC 46540066 >seq7818 Length=84771923 Score = 138 bits (152), Expect = 1e-27 Identities = 196/268 (73%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || |||| | ||| || ||| ||| ||||||||| ||| ||| Sbjct 53925523 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCGCGCCTGC 53925581 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || | || || |||||||| || | || ||||||| || ||| | ||||||| Sbjct 53925582 TGGTGCACCTCTTCCCCGAGCTCTTCACGCCCGACAACCTGCGCAAGCAGTACAACTGCA 53925641 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACTAT 50587 ||||||| |||||||| |||| || |||||| ||| | | | |||| ||||| Sbjct 53925642 GCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCGTCCCGCATCAGGCTCATCCGCCACTAC 53925700 Query 50588 GTGCAGTTGCTGCACCCG-GCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGC 50646 |||||| ||||| ||||| ||| | | ||||| ||||| |||| ||||| ||| Sbjct 53925701 GTGCAGCTGCTGTACCCGCGCGCCAAG-AACGACCGCGTCTGGACGCTGGAGTTCGTGGG 53925759 Query 50647 GTGCCTGGACGAGCGCTGCCGGCGCCGC 50674 |||||||||||||||||||||||| Sbjct 53925760 CAAGCTGGACGAGCGCTGCCGGCGCCGC 53925787 >seq7787 Length=23931036 Score = 105 bits (116), Expect = 8e-18 Identities = 239/357 (67%), Gaps = 27/357 (8%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCA-GCGGTGGCTGTACCTGCG 83115 |||||||| | || ||| |||| | | | | || |||| | |||| | ||| || |||| Sbjct 18160180 AGCAGGGCTTTGAAGTCAGGCTGGATGTCGATGG-CTGGAACGCGGGGCCTGGAC-TGCG 18160123 Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175 ||| ||| |||||| | ||||||| || |||||||| || ||||||| Sbjct 18160122 CACAGGCACGCCGTCTGGGCCCACCATGAC---------GTTCCAGGTGACATCGTTGCA 18160072 Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCG----TGCTCATGTCGT 83231 ||| ||||||||||||| |||| | ||||||| || ||||| || || || Sbjct 18160071 GCAAACTGGAGACCAGGTGATGAATTTGGGGTCGGTCCTGAGCGCAGTGGCACA----GT 18160016 Query 83232 CGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGT 83291 | || || || ||||| | ||||||| |||||| | || || || || | Sbjct 18160015 CACTGGGGGCAGGCAGAAC-------AGGAAGGTGAAGAGGAGTTGCACCTGAGCGCCCT 18159963 Query 83292 TGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGT 83351 | |||||||||||||| || || | || | |||||||| || || || || || Sbjct 18159962 TCACCTCGCACTTCTCAAAAAGGACGGAGGTGGGCTCGAACCCAACGCCGGGTTAGATGT 18159903 Query 83352 GCTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGACCGAACTGGT 83408 |||| |||||| || ||| || | ||| | | || || | || | |||||||| Sbjct 18159902 GCTTGAGGGAATTCAGGATGTCTTCGTTCCTGTCATTCTCTCGATGCCTGAACTGGT 18159846 >seq7843 Length=32746053 Score = 89.7 bits (98), Expect = 6e-13 Identities = 183/264 (69%), Gaps = 16/264 (6%) Strand=Plus/Plus Query 83059 CAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC-A 83117 |||||| | ||||| ||||| ||| ||| | || ||||||||||||||| | | Sbjct 32159397 CAGGGCTTTAATGTCAGGCTCAGTGGCAGTGGTTGGAAAGTGGTGGCTGTACCTGCACCA 32159456 Query 83118 CGGGCGTG-----CCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTT 83172 | ||| || || | ||| ||| || ||||| |||||||||||| | | | | Sbjct 32159457 TCTGGGTGGCAGACCATCTGGGCCC-CCAGGAGCTTCTTGAAGTTCCAGGCAATGCCACT 32159515 Query 83173 GCGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGC---GTGCTCATGTC 83229 || |||||||||| || || |||| || ||||| | ||| |||| ||| || || Sbjct 32159516 GCCTCACACTGGAGTCCTGGTGATGAACTTGGGGTTGGTCATGAGCACAGTG-GCA--TC 32159572 Query 83230 GTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTG--CA 83287 || || | || ||||| || || | |||||||| ||||| || |||| | || || Sbjct 32159573 ATCACTGAGGGCAGGCAGAGCTTCCTGGAGGAAGGCAAAGAG-GGGGGTGCGCCTGCACA 32159631 Query 83288 CCGTTGACCTCGCACTTCTCGAAG 83311 | || ||||| |||||||| ||| Sbjct 32159632 CAATTCACCTCACACTTCTCAAAG 32159655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608736894394880