Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq7823 118 9e-22
seq7767 114 1e-20
seq9 114 1e-20
seq20 104 2e-17
seq7782 95.1 1e-14
seq7828 91.5 1e-13
seq7858 87.8 2e-12
seq7857 87.8 2e-12
seq7764 82.4 7e-11
>seq7823
Length=12955506
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || |||||||| || ||||||||||| | |||||| ||| ||
Sbjct 3355534 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 3355475
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || | ||||| | |||||| || || || |||||||| || |||
Sbjct 3355474 AGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 3355415
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||||| |||||| || ||| ||||| | ||| | || |||
Sbjct 3355414 ATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 3355355
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|||||||| || || || || |||||||||
Sbjct 3355354 CCGGTCAGGGTCTTCACGAAGATCTGCATG 3355325
Score = 89.7 bits (98), Expect = 4e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || |||||||| || ||||||||||| | |||||| ||| ||
Sbjct 3355306 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 3355247
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || || ||||||| | |||||| || || || |||||||| || |||
Sbjct 3355246 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 3355187
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | ||||| |||||| || ||| ||||| | ||| | || |||
Sbjct 3355186 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 3355127
Query 118710 CC 118711
||
Sbjct 3355126 CC 3355125
>seq7767
Length=50048226
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | |||| |||| | || | |||||||| |||||||||||||| ||
Sbjct 33066729 ACCACCACGAAGTCTCCACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 33066788
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| |||||| ||| || || || || ||||| |||| || | ||||||||| |||||
Sbjct 33066789 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 33066848
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| || ||| || || || | ||| | || |||| | || ||
Sbjct 33066849 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAAC 33066908
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| ||| | || || || || || ||||| || |||||||||||
Sbjct 33066909 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 33066956
>seq9
Length=2205763
Score = 114 bits (126), Expect = 1e-20
Identities = 153/212 (72%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| || || || || || || ||| || ||| ||
Sbjct 1749342 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1749401
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| || || | | ||||||||||| || || || |||||||||||||||
Sbjct 1749402 CAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1749461
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG--ACCTCGACGGTCACCGTT 118706
||||| ||| || | || | |||||| || |||| ||||| | ||| | ||
Sbjct 1749462 GATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGTC 1749521
Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| ||||| || || ||||| ||||||||
Sbjct 1749522 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553
>seq20
Length=2862499
Score = 104 bits (114), Expect = 2e-17
Identities = 153/213 (72%), Gaps = 9/213 (4%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT----ATC 118585
|||||||| | || |||||||| || || || || || | || | |||| |||
Sbjct 2689025 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATA---GC-CTGAGGGAGCGTGGCCATC 2689080
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||||| || || | || |||| |||||| || || || ||||||||||||||
Sbjct 2689081 CTC-AGCTGTTGGCCTGCAGAAATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTGTC 2689139
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| ||| || | || || |||| | ||||||||||| ||| | |||
Sbjct 2689140 TTGGATTTTGGCTTTGACATTTTTAACAATGTCACGGGGCTCGACCTCGAGGGTGATCGT 2689199
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| ||||||| || ||||| ||||||||
Sbjct 2689200 CTTGCCCATCAGAGTCTTCACAAAGATCTGCAT 2689232
>seq7782
Length=35566003
Score = 95.1 bits (104), Expect = 1e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646
|| |||||||| || || | || ||||||||||| || || || ||| |||||||||||
Sbjct 14262558 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCT 14262617
Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706
||||| ||| || | || | |||||| || ||| ||||||| ||| | |
Sbjct 14262618 TGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTTC 14262677
Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| ||||| || || ||||| ||||||||
Sbjct 14262678 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 14262709
>seq7828
Length=21597463
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582
||||||||| | || | || ||||| |||||||||||||| || || || ||
Sbjct 14213371 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCC 14213430
Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642
||| || || || || ||||| |||| || | ||||||||| ||||| || || |||||
Sbjct 14213431 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 14213490
Query 118643 -GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCA 118701
|||| ||| || || | | ||| | || |||| | || ||||||| || |
Sbjct 14213491 ATTCTG-AATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGA 14213549
Query 118702 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||| || |||||||||||
Sbjct 14213550 TGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14213586
>seq7858
Length=29646629
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/198 (70%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||| || ||||||||||| | |||||| ||| || ||||| || |
Sbjct 23743205 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCTG 23743264
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC-TTGTCTGTAATTTTTTGTTT 118660
|| ||||||| | || ||| || || || ||||||||| || || || || ||
Sbjct 23743265 GCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTGGATCTTGGCCTT 23743324
Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | ||||| |||||| || ||| ||||| | ||| | || |||| |||||| ||
Sbjct 23743325 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGGT 23743384
Query 118721 TTTTACAAAAATCTGCAT 118738
|| | || ||||||||
Sbjct 23743385 CTTCATGAAGATCTGCAT 23743402
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||||||||| | || | |||||||| |||||||||||||| ||
Sbjct 12424734 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 12424793
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||||| || || || || || ||||| ||| || | ||||||||| |||||
Sbjct 12424794 CAAAGTGCATCCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGG 12424853
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| || ||| || | || | ||| | || |||| | ||
Sbjct 12424854 AATTCCTTCCTTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGG 12424913
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 118737
||||| ||| | || || || || || ||||| | ||||||||||
Sbjct 12424914 CTCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960
>seq7857
Length=43258702
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||| ||||| | || | || ||||| |||||| ||||||| ||
Sbjct 24178182 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGA 24178123
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| |||||| ||| || || || || ||||| |||| | | ||||||||| |||||
Sbjct 24178122 CAGAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGG 24178063
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| || ||| || || || | || | || |||| | || |
Sbjct 24178062 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGC 24178003
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || | || || || | |||||||| || |||||||||||
Sbjct 24178002 CTCGAGAGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 24177955
>seq7764
Length=47977530
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | | |||||| || || || ||||| || | ||||| |||||
Sbjct 34347144 CACCAAGTGCAGGGCAGACTCCTTCTGGATATTGTAGTCTGAGACAGTGCCGCCGTCCTC 34347203
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||| || || || | || |||||| | | || || |||||||||||||||
Sbjct 34347204 CTGCTGATTCCCCGCAAAAATCCCGCGCTGCCGGGCCGGCGGAATGCCCTCCTTGTCTTG 34347263
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGT--CCGTGCTC--TCGACCTCGACGGTCACCG 118704
||||| | ||| |||| || ||||| | | |||| || ||||||| ||| || |
Sbjct 34347264 GATTTTGTCTTTGACCTTCTCAGTGGTGTCACTGGGCTCCATCCACCTCGAGGGTGACGG 34347323
Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 118737
| ||||||| || || | ||||| |||||||
Sbjct 34347324 TCTTGCCGGCTAGGGTCTCCACAAAGATCTGCA 34347356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433788778311424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |