Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq7823 118 9e-22 seq7767 114 1e-20 seq9 114 1e-20 seq20 104 2e-17 seq7782 95.1 1e-14 seq7828 91.5 1e-13 seq7858 87.8 2e-12 seq7857 87.8 2e-12 seq7764 82.4 7e-11 >seq7823 Length=12955506 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || |||||||| || ||||||||||| | |||||| ||| || Sbjct 3355534 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 3355475 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || | ||||| | |||||| || || || |||||||| || ||| Sbjct 3355474 AGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 3355415 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | ||||| |||||| || ||| ||||| | ||| | || ||| Sbjct 3355414 ATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 3355355 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||||||| || || || || ||||||||| Sbjct 3355354 CCGGTCAGGGTCTTCACGAAGATCTGCATG 3355325 Score = 89.7 bits (98), Expect = 4e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || |||||||| || ||||||||||| | |||||| ||| || Sbjct 3355306 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 3355247 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || ||||||| | |||||| || || || |||||||| || ||| Sbjct 3355246 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 3355187 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | ||||| |||||| || ||| ||||| | ||| | || ||| Sbjct 3355186 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 3355127 Query 118710 CC 118711 || Sbjct 3355126 CC 3355125 >seq7767 Length=50048226 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | |||| |||| | || | |||||||| |||||||||||||| || Sbjct 33066729 ACCACCACGAAGTCTCCACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 33066788 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || |||||| ||| || || || || ||||| |||| || | ||||||||| ||||| Sbjct 33066789 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 33066848 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||| || ||| || || || | ||| | || |||| | || || Sbjct 33066849 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAAC 33066908 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||| | || || || || || ||||| || ||||||||||| Sbjct 33066909 CTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 33066956 >seq9 Length=2205763 Score = 114 bits (126), Expect = 1e-20 Identities = 153/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || |||||||| || || || || || || ||| || ||| || Sbjct 1749342 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1749401 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| || || | | ||||||||||| || || || ||||||||||||||| Sbjct 1749402 CAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1749461 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG--ACCTCGACGGTCACCGTT 118706 ||||| ||| || | || | |||||| || |||| ||||| | ||| | || Sbjct 1749462 GATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGTC 1749521 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || || ||||| |||||||| Sbjct 1749522 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553 >seq20 Length=2862499 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 9/213 (4%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT----ATC 118585 |||||||| | || |||||||| || || || || || | || | |||| ||| Sbjct 2689025 ACCAAGTGCAGGGTGGACTCTTTCTGGATATTATA---GC-CTGAGGGAGCGTGGCCATC 2689080 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||||| || || | || |||| |||||| || || || |||||||||||||| Sbjct 2689081 CTC-AGCTGTTGGCCTGCAGAAATCAGACACTGCTGGTCAGGCGGGATGCCCTCCTTGTC 2689139 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||||| ||| || | || || |||| | ||||||||||| ||| | ||| Sbjct 2689140 TTGGATTTTGGCTTTGACATTTTTAACAATGTCACGGGGCTCGACCTCGAGGGTGATCGT 2689199 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||||| || ||||| |||||||| Sbjct 2689200 CTTGCCCATCAGAGTCTTCACAAAGATCTGCAT 2689232 >seq7782 Length=35566003 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || |||||||| || || | || ||||||||||| || || || ||| ||||||||||| Sbjct 14262558 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCT 14262617 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 ||||| ||| || | || | |||||| || ||| ||||||| ||| | | Sbjct 14262618 TGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTTC 14262677 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| ||||| || || ||||| |||||||| Sbjct 14262678 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 14262709 >seq7828 Length=21597463 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582 ||||||||| | || | || ||||| |||||||||||||| || || || || Sbjct 14213371 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGTCC 14213430 Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 ||| || || || || ||||| |||| || | ||||||||| ||||| || || ||||| Sbjct 14213431 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 14213490 Query 118643 -GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCA 118701 |||| ||| || || | | ||| | || |||| | || ||||||| || | Sbjct 14213491 ATTCTG-AATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGA 14213549 Query 118702 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || ||||| || ||||||||||| Sbjct 14213550 TGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14213586 >seq7858 Length=29646629 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||| || ||||||||||| | |||||| ||| || ||||| || | Sbjct 23743205 GTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCTG 23743264 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC-TTGTCTGTAATTTTTTGTTT 118660 || ||||||| | || ||| || || || ||||||||| || || || || || Sbjct 23743265 GCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTGGATCTTGGCCTT 23743324 Query 118661 AACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | ||||| |||||| || ||| ||||| | ||| | || |||| |||||| || Sbjct 23743325 CACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGGT 23743384 Query 118721 TTTTACAAAAATCTGCAT 118738 || | || |||||||| Sbjct 23743385 CTTCATGAAGATCTGCAT 23743402 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | ||||||||| | || | |||||||| |||||||||||||| || Sbjct 12424734 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 12424793 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||||| || || || || || ||||| ||| || | ||||||||| ||||| Sbjct 12424794 CAAAGTGCATCCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGG 12424853 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||| || ||| || | || | ||| | || |||| | || Sbjct 12424854 AATTCCTTCCTTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGG 12424913 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 118737 ||||| ||| | || || || || || ||||| | |||||||||| Sbjct 12424914 CTCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960 >seq7857 Length=43258702 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | ||| ||||| | || | || ||||| |||||| ||||||| || Sbjct 24178182 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGA 24178123 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || |||||| ||| || || || || ||||| |||| | | ||||||||| ||||| Sbjct 24178122 CAGAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGG 24178063 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||| || ||| || || || | || | || |||| | || | Sbjct 24178062 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGC 24178003 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || | || || || | |||||||| || ||||||||||| Sbjct 24178002 CTCGAGAGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 24177955 >seq7764 Length=47977530 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | | |||||| || || || ||||| || | ||||| ||||| Sbjct 34347144 CACCAAGTGCAGGGCAGACTCCTTCTGGATATTGTAGTCTGAGACAGTGCCGCCGTCCTC 34347203 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||| || || || | || |||||| | | || || ||||||||||||||| Sbjct 34347204 CTGCTGATTCCCCGCAAAAATCCCGCGCTGCCGGGCCGGCGGAATGCCCTCCTTGTCTTG 34347263 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGT--CCGTGCTC--TCGACCTCGACGGTCACCG 118704 ||||| | ||| |||| || ||||| | | |||| || ||||||| ||| || | Sbjct 34347264 GATTTTGTCTTTGACCTTCTCAGTGGTGTCACTGGGCTCCATCCACCTCGAGGGTGACGG 34347323 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 118737 | ||||||| || || | ||||| ||||||| Sbjct 34347324 TCTTGCCGGCTAGGGTCTCCACAAAGATCTGCA 34347356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433788778311424