Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq7818 102 2e-16
>seq7818
Length=84771923
Score = 102 bits (112), Expect = 2e-16
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | | || ||||| || || |||| |||||| |||||| || ||
Sbjct 77890200 GGTTCAGTTCCATGTGACCATTGGACACACAGCGCTGTCTCTTTACACAGATTGTCCCTT 77890259
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
||||||||||| || ||| | | ||| |||| | || || |||||||| || |||
Sbjct 77890260 CCCAAAATGGATGCACTGGGCCCTCATTGCCTATGCGATCAGCTTCATATTTCTCTTTCT 77890319
Query 52305 TAACTTCTATTTTAGAACATACAA 52328
|||||||||| || | ||||||||
Sbjct 77890320 TAACTTCTATGTTCGGACATACAA 77890343
Score = 100 bits (110), Expect = 5e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960
|||| ||||| | |||| |||||| | || || ||||| || || ||||| || || |||
Sbjct 77885893 TGGTGGTACTTTGTATCTAAAGGGGTTGAGTATTTGGACACAGTGTTTTTTATCCTGAGG 77885952
Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020
|| ||| || ||||| ||| || || ||||||||||| | ||| |||||||| |
Sbjct 77885953 AAGAAAAACAACCAGGTCTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACATTG 77886012
Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
| ||||| || ||||||||| | || || || ||
Sbjct 77886013 TGGTGGATTGGAATTAAATGGGTCGCAGGGGGACA 77886047
Score = 96.9 bits (106), Expect = 6e-15
Identities = 102/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||||| ||||| || |||||||| ||||||||| | || |||||
Sbjct 77887633 GCATTTTTTGGAGCACAGCTGAATTCCTTCATCCATGTGATTATGTACTCATACTATGGG 77887692
Query 52117 ATGGCCGCTTGTGGTCC-TATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| | || | ||| || | ||||| |||||||| ||||||||||| || | || ||
Sbjct 77887693 TTAACTGCGTTTGGCCCGTGGATTCAG-AAGTATCTTTGGTGGAAACGATACTTGACCAT 77887751
Query 52176 AATGCAGTTGGT 52187
||||| ||||
Sbjct 77887752 GTTGCAGCTGGT 77887763
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923105957434880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |