Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq7823 113 3e-20 seq7857 100 2e-16 seq9 100 2e-16 seq7846 91.5 1e-13 seq7858 84.2 1e-11 seq7782 82.4 5e-11 >seq7823 Length=12955506 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | ||| |||||||| |||||||| || || || ||| | || Sbjct 3355537 AGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3355478 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||||||||| |||||||||| ||||||||| ||| | || ||| || || Sbjct 3355477 TCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCT 3355418 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | || | || | | || || |||| |||||||| Sbjct 3355417 TGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 3355358 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || || ||||| ||||||||||| Sbjct 3355357 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3355326 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| |||||||| | || |||||||| |||||||| || || Sbjct 3355324 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 3355265 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||||||||| || ||||||| ||||||||| ||| Sbjct 3355264 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 3355205 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||| || || ||||| ||| | || | || | || | | || || Sbjct 3355204 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 3355145 Query 34343 TCCACCGTGATGGTTTTGCC 34362 |||| |||||||| ||||| Sbjct 3355144 TCCAGGGTGATGGTCTTGCC 3355125 >seq7857 Length=43258702 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||||||| | || |||||||| ||||| || || || || ||| | || Sbjct 31543687 CAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGCGGCCATC 31543746 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| |||||||||||| |||||||||| ||||||||| ||| | || ||| || || Sbjct 31543747 TTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATC 31543806 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | || | || || | | || || |||| | |||||| Sbjct 31543807 TTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTCCACCTCCAGGGGGATGGT 31543866 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || || ||||| ||||||||||| Sbjct 31543867 CTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 31543899 >seq9 Length=2205763 Score = 100 bits (110), Expect = 2e-16 Identities = 158/220 (72%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | || |||||||| || || ||||| ||||| |||| | || Sbjct 1749340 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCT 1749399 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296 |||| ||| ||||| || |||| || ||||||||||| | |||| | || ||||||||| Sbjct 1749400 TCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGG-ATGCCCTCCTTGTC 1749458 Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCG--ACGTCCACCGTGAT 34353 || ||| ||||| | || | || | || | | ||| || || | ||||| Sbjct 1749459 TTGGAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGAT 1749517 Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 ||| ||||| || || || |||||||||||||||||| || Sbjct 1749518 GGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCT 1749557 >seq7846 Length=12828309 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 ||| |||| ||| | ||| || ||||| ||||||||||| ||||| || |||| Sbjct 9163023 CAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCGTC 9163082 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| ||| || || || || || | || |||||||||| ||| | || ||| ||||| Sbjct 9163083 CTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTC 9163142 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | | | || | || | | || || |||| |||||||| Sbjct 9163143 CTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 9163202 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCG 34391 || ||||| | || ||||| ||||||||||||| Sbjct 9163203 CTTACCGGTCAAGGTCTTCACGAAGATCTGCATCG 9163237 >seq7858 Length=29646629 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | ||| |||||||| |||||||| || || || ||| | || Sbjct 23743191 AGAACCAGGTG-AGAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 23743249 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG-TC 34296 |||| |||||||| || || ||||||| || |||||| ||| | || |||||| || Sbjct 23743250 TCCAGCTGCTTGCTGGCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATC 23743309 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | || | || | || | | || || |||| |||||||| Sbjct 23743310 CTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 23743369 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| || || |||| ||||||||||| Sbjct 23743370 CTTGCTGGTCAGGGTCTTCATGAAGATCTGCAT 23743402 >seq7782 Length=35566003 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 || |||| || | ||||| ||||| |||| | | |||| ||| ||||| || |||| Sbjct 14262520 CTCTCTGGATATGATAGTCTGACAGAGTACGGCCAGCTTCCAGCTGTTTGCCCGCAAAAA 14262579 Query 34260 TGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 | || ||||||||||| | |||| | | ||||||||| || ||| ||||| | || Sbjct 14262580 TCAGACGCTGCTGGTCAGGCGGG-ATGTCCTCCTTGTCTTGGAT-TTTGGCTTTGACATT 14262637 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | || | | || || || | |||||| | ||||| || || || ||||| Sbjct 14262638 CTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTTCTTGCCCGTCAGGGTCTTCAC 14262697 Query 34378 AAAGATCTGCATCGCT 34393 ||||||||||||| || Sbjct 14262698 AAAGATCTGCATCTCT 14262713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323041004472320