Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq7819 1750 0.0 seq7788 188 5e-43 seq7837 84.2 2e-11 >seq7819 Length=28646420 Score = 1750 bits (1940), Expect = 0.0 Identities = 1414/1717 (82%), Gaps = 66/1717 (4%) Strand=Plus/Minus Query 107084 TCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCATCCACAAG------ 107137 ||||||||||| | ||| ||||| || |||| ||| ||| || || ||||| Sbjct 16271936 TCCCAGCATGAATGGCTTGTTTGTAGGGTCAGATTATAGACCTCTGTCAACAAGCCAGGG 16271877 Query 107138 -------GGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTT 107190 | || |||||||| |||||||||||||||||||||| |||||| || Sbjct 16271876 ATAAGAGGTTCCTAGGCAGGTCTTGACTGAGGATATTTGTCTAGAGAAGAAAT------- 16271824 Query 107191 TACCATCACTCTGGAGTTGAACTTGATGTT--------------CTGGATTAGTTTGTAA 107236 ||| || ||||||||| ||||||||| | || ||||||||||| Sbjct 16271823 ----ATCCCTTTGGAGTTGAGCTTGATGTTTCTGTGAATACATTCAGGGTTAGTTTGTAA 16271768 Query 107237 TTAAAGGCATTTTGTTCTGTCCAAGGATC---TCCTCCTCCACCTTGCCTGTGCCCAAAC 107293 || ||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||| Sbjct 16271767 TTGAAGGCATTTTGTTCTGTCCAAGGATTCCATCCTCCTCCTCCTTCCCTGTGCCCCAAC 16271708 Query 107294 TCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACA 107353 | || | || ||| |||||||||||| | ||||||||||||||| | ||| || Sbjct 16271707 TGA--TGGTTTCTCATTCCATGAAGATGGTTTGGTGGAAGAAGAAGCCCTTTCGGCAGCA 16271650 Query 107354 TCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCT 107413 ||| ||||||||||||||||||||||||||||||||||| ||| ||||||| |||| || Sbjct 16271649 TCACCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTGGTTGCTCTGAGGTTTTCTCT 16271590 Query 107414 CAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCA 107473 |||||| |||||||| | || ||| |||||||||||||||||||||| ||||| |||| Sbjct 16271589 CAGGTTGAAATGTGACTTTGAATCCCTGGATCTGGAGTCCAGGGACTTTCAGAGCCAGCC 16271530 Query 107474 CTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTC 107533 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 16271529 CTGTAGGGACATCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTC 16271470 Query 107534 TGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGT 107593 ||| |||| |||||||||||| | |||||| |||| ||||| ||||||||||| || Sbjct 16271469 TGGAATCATCCGAGGGGACCAGCAGGCAGTGACAGAGGCTCTCCTGGACAACCTGGAGGT 16271410 Query 107594 GAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGA 107653 ||||| |||||| ||| |||| | |||| | ||||| ||||| |||||||||||||| Sbjct 16271409 CAAGAAGAAGCGGGAGCCCTTCACAGACACCGACTACCTTAACATGACCAGAGACTGTGA 16271350 Query 107654 GCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTT 107713 || ||| |||||| ||||||||||||||| |||||| ||||| ||||||||| ||||||| Sbjct 16271349 GCACTTTAAGGCCGAAAGGAAGTTCATACGGTTCCCTCTGAGCAAAGAAGAGTTAGACTT 16271290 Query 107714 CCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCG 107773 ||| ||||| ||||| |||||||||||||||||||| || ||||||||| | |||||||| Sbjct 16271289 CCCTATTGCATACTCTATGGTGGTCCATGAGAAGATCGAGAACTTTGAAAGACTGCTGCG 16271230 Query 107774 AGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGAC 107833 ||| ||||||||||||||||||||||||||||||| ||||||| ||| |||||||| || Sbjct 16271229 AGCTTTGTATGCCCCTCAGAACATATACTGTGTCCATGTGGATGAGAAATCCCCAGAAAC 16271170 Query 107834 TTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAA 107893 |||||| ||||| |||||||| ||| | || |||||||| ||||||||||| |||||||| Sbjct 16271169 TTTCAAGGAGGCAGTCAAGGCGATTGTGTCGTGCTTCCCAAATGTCTTCATAGCCAGTAA 16271110 Query 107894 GTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGA 107953 |||||| | |||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct 16271109 GTTGGTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCTGACCTAAACTGTATGGA 16271050 Query 107954 AGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTT 108013 ||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||| Sbjct 16271049 GGACTTGCTCCAGAGCTCAGTGCCGTGGAGATACTTACTGAATACATGTGGGACGGACTT 16270990 Query 108014 CCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAG 108073 || |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| Sbjct 16270989 TCCTATAAAGACCAATGCTGAGATGGTCCTGGCCCTCAAGATGTTGAATGGGAAGAACAG 16270930 Query 108074 TATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGT 108133 ||||||||| || |||| |||||| ||||| |||||||| ||| | ||||||||| Sbjct 16270929 TATGGAGTCAGAAAAACCTACTGAGTACAAAAGGTCTCGCTGGACATATCACTATGAGGT 16270870 Query 108134 GACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCAT 108193 |||||| || ||||| ||||||||||||||||| |||||||| |||||| |||| || Sbjct 16270869 GACAGATGCATTGTACATAACCAGCAAGATGAAGGATCCTCCCCCGGATAATATACCTAT 16270810 Query 108194 GTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAA 108253 ||||||||||||||||||| ||||||| ||||||| ||||||| |||||||| || || Sbjct 16270809 GTTCACAGGGAATGCCTATATTGTGGCTTCTCGAGATTTTGTCCGGCATGTCTTGGAGAA 16270750 Query 108254 CCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCT 108313 ||| || |||||||||||| | || ||||| |||||||||||||||||||| ||||| || Sbjct 16270749 CCCCAAGTCCCAAAGACTGATCGAGTGGGTGAAAGACACCTATAGCCCCGATGAACATCT 16270690 Query 108314 CTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTA 108373 |||||||||||||||||||| ||||||||||| || ||| |||| ||||||||||| Sbjct 16270689 GTGGGCCACCCTTCAGCGTGCACCGTGGATGCCGGGTTCTATTCCCTACCACCCCAAGTT 16270630 Query 108374 TCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGA 108433 ||||||||| |||||||| ||||| |||||||| ||||||||||| |||| |||||||| Sbjct 16270629 TCACATCTCTGACATGACAGCCATTGCCAGGCTGGTCAAGTGGCAAAACCATGAGGGAGA 16270570 Query 108434 TGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCAT 108493 |||| |||||||| ||||||||||| |||||||| ||||| | | || | |||| | Sbjct 16270569 CATCAGTATGGGGGCACCTTATGCACCTTGCTCTGGGATCCACCAGCGGTCTGTCTGTGT 16270510 Query 108494 TTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTT 108553 ||| || | ||||||||| | |||||||| || ||||||||||| ||||| |||||||| Sbjct 16270509 TTATGGAACTGGGGACCTGCATTGGATTCTTCAAAACCATCACCTGTTGGCTAACAAGTT 16270450 Query 108554 TGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGC 108613 |||||| | ||||||||| || || || |||||||||||||||||| ||||| ||||||| Sbjct 16270449 TGACCCAAAGGTGGATGACAATGTTCTTCAGTGCTTAGAAGAGTACTTACGTTATAAGGC 16270390 Query 108614 CATCTATGGGACTGAACTTTGAGCT------------------GCACTGTGGGCCAGGGA 108655 |||||||||||||||||| |||| | | ||||||| |||| | Sbjct 16270389 CATCTATGGGACTGAACTCTGAGATACCCTATCAGAGAAGTGCTCCCTGTGGGGCAGGAA 16270330 Query 108656 C-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCTGTGG 108714 | ||||| ||||||||||||| || |||| || |||||||||||||| ||||| ||| Sbjct 16270329 CATGTGCAAACATGCCCAGGGGGTGCTGGGAC--AGTGGGGTGGGGGACCGGGGCTCTGG 16270272 Query 108715 AATCCATGGCATCCCCCAGGGTCAGAGGGCTGCTTTG 108751 ||||| |||||||||| | ||||| || |||| || Sbjct 16270271 AATCCTTGGCATCCCCAA--GTCAGGGGTTTGCTATG 16270237 >seq7788 Length=6094078 Score = 188 bits (208), Expect = 5e-43 Identities = 584/889 (66%), Gaps = 35/889 (4%) Strand=Plus/Plus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || |||||||||||| ||| || ||||| || || || | ||||| ||| | || Sbjct 1358189 CCCCTTAGTAAAGAAGAGGAAGAGTTTCCCATAGCATATTCTCTAGTGGTTCATCACAAA 1358248 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| |||| |||| ||| ||||| | ||| |||||||| | ||||| | Sbjct 1358249 ATTGAAATGCTTGACAGGCTCCTGAGAGCCATCTATATGCCTCAGAATTTCTACTGCATT 1358308 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 |||||||| ||||| || | || | ||||| | | ||| |||||| Sbjct 1358309 CACGTGGACAGAAAGTCAGAGGATTCCTTTTTGGCCGCGGTGATTGGCATCGCGTCCTGC 1358368 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| |||||||| |||||||| || ||| ||||| |||||||| ||| | Sbjct 1358369 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTGTATGCCTCATGGAGTCGG 1358428 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGC--CATGGAAGT 107985 || || |||||||| ||||| ||| ||||| | || ||| | | ||||| ||||||| Sbjct 1358429 GTTCAGGCTGACCTCAACTGCATGCAAGACCT-CTACAG-GATGAGTGCAGATTGGAAGT 1358486 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 |||| | ||| ||||| | || || ||||| || ||||| || || |||| | Sbjct 1358487 ACTTGATAAATCTTTGCGGTATGGATTTTCCCATTAAAACCAACCTGGAAATTGTCCGGA 1358546 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG---GTACCTTCTGAGTCCa 108102 |||||| | | | |||| | |||| | || ||||| | || || | | Sbjct 1358547 AGCTCAAGTCGCTAATGGGTGAAAACAACCTAGAAACTGAGAGAATGCCATCCAA---TA 1358603 Query 108103 aaaaaaaTCGCTGGAAATACCGCTAT---GAGGTGACAGACACACT---GTACCC---TA 108153 ||||| | | |||||| | | ||| | || | | | || | || | | Sbjct 1358604 AAAAAGAAAGGTGGAAAAAGCATTATACAGTTGTTAATGGGAAGCTGACGAACACGGGGA 1358663 Query 108154 CCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATT 108213 | ||| || | ||||||| | || | ||| |||| |||| | |||||||| Sbjct 1358664 CTGACAAAAT---GCACCCTCCTCTCGAAA---CACCTCTGTTTTCAGGCAGTGCCTATT 1358717 Query 108214 TTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGG 108273 |||||| | | | | || |||| |||| || ||| ||||| | Sbjct 1358718 TTGTGGTCAGTAGGATGTACGTGGGGTATGTGCTAGAGAATGAAAAAATCCAAAAGTTTA 1358777 Query 108274 TTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG 108333 | || |||| ||||| || || ||||| || || | ||||||||||| ||||| | | Sbjct 1358778 TGGAGTGGGCTAAAGATACATACAGCCCGGATGAGTATCTCTGGGCCACTATTCAGAG-G 1358836 Query 108334 CTCCGTGGATG--CCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACAT 108388 ||| | |||| || ||||| | |||| ||||| |||||| |||| || ||||| Sbjct 1358837 ATCCCT-GATGTCCCAGGCTCACTGTCCTTAAGCCA---GAAGTATGACATGTCTGACAT 1358892 Query 108389 GACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGC 108448 | ||| || || ||| | ||||| |||||||| ||| || ||||| || ||| || Sbjct 1358893 GCATGCAATTGCAAGGTTTGTCAAATGGCAGTATTTCGAAGGGGATGTTTCCAAGGGTGC 1358952 Query 108449 GCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGA 108508 || ||| |||||||| ||| ||||| | | | | ||| | | ||| || ||||| Sbjct 1358953 CCCCTATCCACCCTGCAGTGGGGTCCATGTGCGTTCTGTGTGCGTGTTCGGAGCAGGGGA 1359012 Query 108509 CCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557 | || ||||||| || | || || ||| | || || |||||||||||| Sbjct 1359013 CTTGAACTGGATGCTACGCAAGCACCACTTGTTTGCCAACAAGTTTGAC 1359061 >seq7837 Length=29518589 Score = 84.2 bits (92), Expect = 2e-11 Identities = 175/251 (70%), Gaps = 10/251 (4%) Strand=Plus/Plus Query 107782 ATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAG 107841 ||||||| | || | |||||||| |||||||||| |||| | |||| || || |||| Sbjct 13223024 ATGCCCC--AAAATGTCTACTGTGTTCACGTGGATGAGAAGGCGACAGATACATTTAAAG 13223081 Query 107842 AGGCGGTCAAGGCCATTATTTC-CTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTC 107900 | || || ||| | |||| | ||||||||| |||| ||| |||| ||| ||| Sbjct 13223082 ATGCAGTGAAG-CAATTACTGAGCTGCTTCCCAAATGCTTTCCTGGCTTCCAAGATGGAG 13223140 Query 107901 CCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGA-CTT 107959 || || || |||| ||||| | || |||||||||||||| || |||| ||| Sbjct 13223141 CCAGTTGTCTATGGGGGGATCTCCAGGCTCCAGGCTGACCTGAACTGCATCAAAGACCTT 13223200 Query 107960 GCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCG-GGAC-AGACTTCCCC 108017 || | | | ||||| ||||||||| | | ||||| | |||| |||||| ||| Sbjct 13223201 GCGGC-GTCCGACGTGCCCTGGAAGTACGCCATCA--ACATGTGTGGACAAGACTTTCCC 13223257 Query 108018 ATAAAGACCAA 108028 | || ||||| Sbjct 13223258 CTGAAAACCAA 13223268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348235387091328