Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 215 5e-51
seq7820 109 5e-19
seq7842 105 6e-18
seq7860 84.2 2e-11
>seq7767
Length=50048226
Score = 215 bits (238), Expect = 5e-51
Identities = 565/859 (66%), Gaps = 15/859 (2%)
Strand=Plus/Minus
Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954
|| || || || ||||| | ||||| |||| ||||| || ||||||||||| |
Sbjct 16036763 TTTGACATCACTCCCATCCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTT-----TC 16036709
Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCA 14014
||||||||||| ||||| ||||| || |||||||||||| | | || || || ||
Sbjct 16036708 CCTTCCAGTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCA 16036649
Query 14015 CAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCA 14074
||||||| || | | | || | || | ||||||||| | || ||||||
Sbjct 16036648 AAACCTAGCTCCAGCATAAGTCGGTGTGCCACAAACTCAATACACTGCTTCATTAACGTG 16036589
Query 14075 CAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGAC 14134
|||||||| || || || || | || | | | || | || | | |||||
Sbjct 16036588 CAATTCATCCCAATGAGCTTCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGA 16036529
Query 14135 ACAGCCTCGTTTATAATAAT---CGTAATAATTTCATTAGAAGGAGGATATTTTAGATGT 14191
|| || | | ||||| || | | | | | || ||||| | || |||
Sbjct 16036528 ACGGCAT---TAATAATTATTTCCTTCACTCTCTGCTTGGAAGGTTTGTGGACCAGGTGT 16036472
Query 14192 TTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTT 14251
|| || || | || ||||| ||||| || | ||||||||||| ||||||||||| ||
Sbjct 16036471 TTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTG 16036412
Query 14252 GAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT 14311
||||| | || ||||||| | ||||| || | ||| ||||| | || || ||
Sbjct 16036411 GAAAACATGGGGCCAGGCATCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAA 16036352
Query 14312 CCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCT 14371
|| |||||||| ||||| || || |||||||| | | | ||||| || | | ||
Sbjct 16036351 CCAGAAAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCC 16036292
Query 14372 TTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT 14431
| ||||| | |||| | ||||| || | || || || | | || ||||||
Sbjct 16036291 TCTTTGTCCCCAGTCCAATGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTC 16036232
Query 14432 TCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGT 14491
|| | || || || | | |||| | ||||| | | | || || || ||||| ||
Sbjct 16036231 TCGAGGGCGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGG 16036172
Query 14492 AAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTA 14551
| || ||||| ||||| || ||||||||||| || || | || ||||| ||||| |
Sbjct 16036171 AGACTGTACATCTCAGAATGGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGG 16036112
Query 14552 GCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14611
||||||| || || ||| | ||| | || |||| |||||||| ||||| |||
Sbjct 16036111 GCTTCTGTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCA 16036052
Query 14612 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGT 14671
||||| | ||||| || |||| | || | ||||||| ||| ||| | ||
Sbjct 16036051 TCACTCGGCGCAAAGAAAGCCAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTCAGG 16035992
Query 14672 TTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14729
|| | | ||| || ||||| |||||||| || || ||| |||||||||| ||
Sbjct 16035991 GATTCCTGGT--GCTGAATGTCCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAG 16035934
Query 14730 CAACAGCTTTTTTATACAT 14748
| ||||||| | ||||||
Sbjct 16035933 CCTCAGCTTTCTCATACAT 16035915
>seq7820
Length=31847680
Score = 109 bits (120), Expect = 5e-19
Identities = 452/712 (63%), Gaps = 1/712 (0%)
Strand=Plus/Minus
Query 13929 CTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATG 13988
|||| || |||||||||||||| || ||||||||||| ||||| ||| ||| |||||||
Sbjct 14843928 CTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCCCTAAGGTCAAATG 14843869
Query 13989 GATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGA 14048
||||| | | | || || | |||||||||| | | || || || ||||
Sbjct 14843868 GATTTTCTACTCTGGAAACCTTGCTAAAACCTAGTTCCTACCTAAGTCAGTCTGCCATGA 14843809
Query 14049 ACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATAT 14108
| |||||||| || | ||| || ||||| || || || || | || | |
Sbjct 14843808 ATTCAATATACTGCTTTACTAACGTGCAGTTCATCCCAATGAGCTTCGCGGGCAAGGCCT 14843749
Query 14109 TGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCAT 14168
| | || || | ||||| || || | | | || || | | | | | |
Sbjct 14843748 CTGGGAGGAACTCCTGGTCTATCCTAACGGCATTGATAATTATTTCCTTCACTCTCTGCT 14843689
Query 14169 TAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 14228
||||| || || ||||| || || | || ||||| | || | ||||
Sbjct 14843688 CTGAAGGTTTATGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTTGTGGTGTAAACCCT 14843629
Query 14229 CATCTCTACTAATAAGTTCGTTTGAAAAT-GTTAATCCTGGCATCAATCCTCGttttttt 14287
||||||| |||||||| || || ||||| | | || ||||||| | | ||| ||
Sbjct 14843628 CATCTCTGCTAATAAGCTCATTGGAAAACCGCGAGGCCAGGCATCAGGCTGCATTTCTTG 14843569
Query 14288 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14347
| ||| ||||| | || | || || ||||| | ||||| || |||||||| |
Sbjct 14843568 AGCCAGAATATCGACGCAGAAGAACCAAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCC 14843509
Query 14348 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAt 14407
| | ||| || | | || | ||||| | | ||| ||||| || |
Sbjct 14843508 ACATCCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAACCCAACGCAAGGCCCAGTCTGCC 14843449
Query 14408 ttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTA 14467
|| || | | || |||||| || || | || || | | ||| ||||||| | |
Sbjct 14843448 TTCTTCCTTCCACAAGGCATTGTCTCGATGGTGTTGAAGAGAAATTCTGTCTCTTTGGAA 14843389
Query 14468 CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCT 14527
| ||| || || ||| | || | ||| |||| ||||| || ||||||||||| ||
Sbjct 14843388 TCTTTAATATAAGTGTCAGTGAGGAGACTACACATCTCAGAATGGATGTTTTCCATGGCA 14843329
Query 14528 ATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCG 14587
|| || || ||||| ||||| | ||||||| | | || ||| | | | | ||
Sbjct 14843328 ATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTCAACTTCTTGGCCACACCGCTCC 14843269
Query 14588 GCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGT 14639
|||| |||||||| ||||| ||| |||| || ||||| || |||| ||||
Sbjct 14843268 ACCAAGTTTTCATTTACTATGCCAACACTCGCCGCAAAGAAAGCCAGAATGT 14843217
>seq7842
Length=42459490
Score = 105 bits (116), Expect = 6e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
|||||||||| ||||||||||| || ||||| || | || ||||||| || ||||| |
Sbjct 7548465 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 7548406
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| | ||| ||||||| || || || || |||||||| ||||| || || |||||||| |
Sbjct 7548405 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 7548346
Query 14346 CTATTAATCGTTCTCC 14361
| | | ||||||||
Sbjct 7548345 CCACAACCCGTTCTCC 7548330
Score = 100 bits (110), Expect = 3e-16
Identities = 107/139 (77%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13914
|| || ||| |||| || | |||| ||| || | || | | || || || ||||| |
Sbjct 7549966 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 7549908
Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974
||||| || | ||||| || |||||||||||||| || ||||||||||| ||||| ||
Sbjct 7549907 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 7549848
Query 13975 CATAAAATCAAATGGATTT 13993
|||||| ||||||||||||
Sbjct 7549847 CATAAAGTCAAATGGATTT 7549829
>seq7860
Length=13696022
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/211 (69%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 132204 CCCAAAAAGATG-CATAATGGAACAATAGAATACACAAGTATAGATATGCATAAAGGTGT 132262
||| |||||||| || |||| | || |||| ||| || || || |||| || |||||
Sbjct 3634479 CCCCAAAAGATGTCACGATGGCATTATTGAATTCACCAGCATCAATGTGCACAATGGTGT 3634420
Query 132263 ATCCCCGTCTAGGCGAGGAGATTTGGAAATTTTAGGATATTGTATAATAAAATGGTTAGG 132322
||||||| || || || ||||||||||| | || ||||| || || | || | |
Sbjct 3634419 CGCCCCGTCAAGACGTGGTGATTTGGAAATCCTTGGTTATTGCATGATCCAGTGACTTAG 3634360
Query 132323 TGGTAAATTGCCATGGGAAAATGATTTAAAAAATTGTAAATATGTAATGGAGTCAAAGAT 132382
||| | | || ||||| || |||| ||| | ||| ||||| | || || || ||
Sbjct 3634359 TGGCCATCTTCCTTGGGAGGATAATTTGAAAGACCCTAACTATGTTAGAGATTCCAAAAT 3634300
Query 132383 TAAATACATGAACGATATTGGAAATTTAATG 132413
|| ||||| | |||||| | |||| |||
Sbjct 3634299 TAGATACAGAGAAAATATTGCAGATTTCATG 3634269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482298137192960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |